Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02734 ATGGCCACTTCTTATAAACCATTCATATCGAATTGCTTCATTCAGAGAAGACTCTCCCATCTCTCACAAAAATCTCCTCACTTCAACCTTCCACACTTCCCTACCTTCAAGCAGCCACTCAAGAAAATTCTGCCTGGACTCCCTTTACCAATTGATGTTCAAAAGACTATGACAGACGCTGCAGCTAAATTGCTTGAAGCTTTTGTAGATTCATTCTTTGAATTTGTTGACCAGCCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATTCTTGTTACCAGCATCCAAGGATCAATTCCTGATGATTTTCCAGAGGGTGTTTACATTAGAAATGGACCAAATCCAGTTTTTGGAGGATTAAAATCAACAAATTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTCCACGCAATTTACTTTAAAAGGTCAAGTCAAGGGAGCTGGAAAGTTCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATAGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATTGAAGGCGATTCACTCGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGCGATTTGGCAAAGTAAACAAGTATATCAGCAACACCAATGTGTTTGAGCATTCTGGGAAGTTTTACTCGGTTGCCGAAAATCACATTCCACAAGAGATTGATATCTTCACACTAAAAACTGTAAGAAATTGGAATGTCAATGGAGCCTGGGATCGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGGTACGGGTGAGCTAGTAACGTTAGGGGTTGCACCAACCAAACCTTTTGCCGTTGCTGGAATTATTTCTGCTGATGGAGAGAAATTGGTTCAAAAAGTTGACCTCCAACTAAATAGGTGCACTCTTTGTCATGAAATTGGTGTTACAAAGAGGTACATTGTGATCATGGATTTTCCTCTAACTATTGATCTAAACAGACTTCTTAGAGGAGGCCGGATTGGGATACTACCACGCTATGGTGATGCCAACTCTATCAAATGGTTTGAGGTGGAACCTAACTGCACTTTCCACATTATCAACTCTTTTGAGGATGGACACGAGGCAATGAGGGGTTGCTCATCTCTGGATTCGCTAATTCCTGGACCTAACCTAAGTTTGAAGGAGTACGAGGGGTTATCTCGCTGTCACGAGTGGCGATTGAATATGCACTCAGGAGAAGTTAAGGAGAAAGATATCTGTGGAGGCAATGTAGTTTATATGGATTTTCCTGTGATCAATGGAAACTTCATAGGAATGAGGAATAGATATGCATACACCCAAGTAGTCGATCCAATTGCAAGCTCTAATCAAGGAGCGCCAAAATATGGAGGTTTAGCAAAGCTTTACTTTGAAGAATCATGCAAGGGAGACAAAGAGAAAGCAGAAGAAGCTGTAAGAGTGGAGTGCCATATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCATAGAAGGGGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACTAACATATCTGAAGTTCATATAATCGACGCAAAGAAGTTTTCTGGTGAAGTGGTTACTAAAATTACAATGCCTCGCAGAGTACCATATGGGTTTCATGGAGCTTTCATGCAAATTTCTTTTCAGGCACAGGAGCACAACAGTGTGTATCACCAACAAACGCCTTAA 1746 0.4198 MATSYKPFISNCFIQRRLSHLSQKSPHFNLPHFPTFKQPLKKILPGLPLPIDVQKTMTDAAAKLLEAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGSIPDDFPEGVYIRNGPNPVFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSQGSWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTVRNWNVNGAWDRPFTSHPKKAPGTGELVTLGVAPTKPFAVAGIISADGEKLVQKVDLQLNRCTLCHEIGVTKRYIVIMDFPLTIDLNRLLRGGRIGILPRYGDANSIKWFEVEPNCTFHIINSFEDGHEAMRGCSSLDSLIPGPNLSLKEYEGLSRCHEWRLNMHSGEVKEKDICGGNVVYMDFPVINGNFIGMRNRYAYTQVVDPIASSNQGAPKYGGLAKLYFEESCKGDKEKAEEAVRVECHMFEKNTFCSGAAFVPIEGGLEEDDGWIIAFVHNEDTNISEVHIIDAKKFSGEVVTKITMPRRVPYGFHGAFMQISFQAQEHNSVYHQQTP 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02734 581 PANTHER BETA-CAROTENE DIOXYGENASE 94 563 IPR004294 GO:0016702
Vimu10g02734 581 Pfam Retinal pigment epithelial membrane protein 88 563 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02734 Vimu-Chr10 38738747 38742138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02734 - - vun:114164271 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02734 10 38738747 38742138 Vimu10g02734 10 38738747 38742138 ECH