Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02728 ATGTCCCGTAGTGAAAAGGAATTCCACCAATCAAGATTCCCATACACCAATTTTCATCTTCATAAATCATTTCTCAATATCTCCTATAAATATGCATCATTATTCTCATTCACAAAACCCAAACCCTTCTATTTTCTTCTTTTTTCTATCTCCATGGCTTTCACAACCATGCCTTCTTCACTCACAAATTCCACTTCTTCTCCAACTATGCTTCTTCCTCCCATCTCTCATCATAACAATCATATTTTACCTCCAAATAAACTCATCGTCAATAAACCCCAACGCAAACTCCTACACTTAACCGTTGCAAATGTTGCAAGTCCTTCATTACCCTTGATTACCCCACCAACACCGGAGGAACAACTCCCAGGAACCACCGCCGGCCGCCACCACCACCACCATGTTGCATGGACTAGTATCTCGCAGGAGAGCTGGGAAGGAGAGTTACAAGTTGAAGGGCATATACCACCATGGCTGAATGGAACGTACCTGAGGAATGGGCCTGGGATGTGGCACATAGGAGACTATGACTTCCGACACCTCTTCGACGGTTACGCTACGGTGGTCAAGCTACGACTCCAGGAAGGCCGGTTATTCGCCGGCCACCGTCAAATTGAATCGGAGGCGTACCGTGCGGCGAAGAAGAACCAGAAGATATGCTACCGGGAATTTTCGGAAGTGCCAAAAGCGGCGAATTTCCTGGCGTATGTGGGGGAGCTGGCGAGCCTGTTCTCCGGCGCGTCGCTTACGGACAACGCGAACACCGGCGTGGTGAAGCTTGGCGACGGGAGGGTGGTGTGTCTGACGGAGACGCAGAAGGGGTCGATTGTGATTGACCCTGAGACGCTGGAAACGGTGGGGAAGTTCGAGTACAGTGACTCGTTGGGGGGTCTGATACACTCTGCGCACCCCGTTGTGACGGATAAGGAGTTTGTGACGTTGTTGCCGGATTTGGTGAGAGCAGGGTACCTTGTGGTGAGGATGGAGCCCGGTACCAATGAGAGGAGGGTAATTGGGCGGGTCAATTGCCGGGGCGGGTCTTCACCCGGTTGGGTTCACTCTTTTCCTGTCACCGAACACTATGTTGTTGTGCCCGAAATGCCGTTGAGGTACTGTGCTCAGAATCTGCTCAAGGCTGAGCCTACTCCTTTGTACAAGTTTGAGTGGCACCCTCAGTCTAAAGCTTTTATGCATGTCATGTGCAAGACCAGTGGAAATATTGTGGCAAGTGTTGAAGTACCTCTGTTTGTTACTTTCCATTTCATTAATGCTTATGAGGAGGAAGACGAAGATGGGAGGGTGACGGCCATTATTGCCGACTGTTGTGAGCATAATTCTGATCCTACCATTCTTGATAGACTTAGGTTACAGAACCTTCGTTCTTTTAATGGTGAAGATGTTCTACCCGATGCTAGGGTTGGACGGTTCAGAATACCACTGGATGGAAGTCCATATGGAGAACTAGATGCAGCGTTGGACCCAAATGAACATGGGAAAGGCATGGACATGTGCAGCATAAACCCTAATCATCTAGGAAAGAAATACAGATATGCGTATGCTTGTGGAGCACAGCGACCTTGTAACTTCCCCAACACACTCACCAAGCTTGATTTAGAATTGAAAAAGGCTACGAACTGGCATGAAGAAGGTGCCGTGCCCTCAGAACCATTCTTTGTTGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCCATTGTCAGCGAGAAAAATGGAGAAGGGTATGCGTTGCTGTTGGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAGTTCCCTTATGGACTTCCCTATGGGTTGCATGGATGCTGGGTTCCAAAGGAGTAA 1854 0.4876 MSRSEKEFHQSRFPYTNFHLHKSFLNISYKYASLFSFTKPKPFYFLLFSISMAFTTMPSSLTNSTSSPTMLLPPISHHNNHILPPNKLIVNKPQRKLLHLTVANVASPSLPLITPPTPEEQLPGTTAGRHHHHHVAWTSISQESWEGELQVEGHIPPWLNGTYLRNGPGMWHIGDYDFRHLFDGYATVVKLRLQEGRLFAGHRQIESEAYRAAKKNQKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPVVTDKEFVTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGSSPGWVHSFPVTEHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPQSKAFMHVMCKTSGNIVASVEVPLFVTFHFINAYEEEDEDGRVTAIIADCCEHNSDPTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGELDAALDPNEHGKGMDMCSINPNHLGKKYRYAYACGAQRPCNFPNTLTKLDLELKKATNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02728 617 PANTHER BETA-CAROTENE DIOXYGENASE 139 615 IPR004294 GO:0016702
Vimu10g02728 617 Pfam Retinal pigment epithelial membrane protein 141 615 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02728 K17913 - gmx:100814148 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02728 10 38669867 38672788 Vimu10g02728 10 38669867 38672788 ECH