Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02726 ATGGCTCATCTCTTCAGGGACCTATCATTGGGCCATTCCAAGAGAGACACAACGCCGCCTACCATAATGCCTCCAAAACCTTCCGCTCTTTCTTCCGCCGACGACCTCCCTTCTCCACTCGGCCAACTCGCCGCCAACCTTTCCGATTCCGACCTTTCCTTAACAGCCTTCGAGATCTTCGTTGCCGCCTGCCGCACCTCCTCCGGCAAGCCCCTCAGTTCCATCCCTAATCACTCCTCCGCCAATTCACCCGGCCAGAACTCGCCCAACTCGCAAGCACTCCAGCGATCCATCACTTCCACCGCCGCCAGCAAGGTTAAGAAGGCCTTCGGCTTGAAATCGCCTGGTTCGGGCTCCAGAAAGAGTCCTGGCTCCGGTTCGACTTCCGGTTCGGGCCAGGGAAAGCCGAAGCGACCGTTAACAGTCGGAGAACTCATGCGGAACCAGATGAGGGTTTCCGAAGCCATGGATTCGCGCGTGAGACGCGCTCTTCTCAGGATTTCCGCTGGCCAGGTCGGAAGAAGGATTGAGTCTGTGGTGGTTCCGCTTGAGTTGCTGCAGCAACTCAAGGCTTCGGATTTTACTGATCAGCAAGAGTACGTTGAGTGGCAGAAAAGAACCTTGAAGGTTCTCGAGGCTGGTTTAATTTTGCATCCACAAATTCCCTTGGATAAGTCGAATTCTGCGGCACCGCGTCTGCGGCAGATTATTCATGCTGCATTGGATAAGCCTATAGAAACCGGGAAGAATACCGAATCTATGCAGGTTCTTCGTAGTGCTGTCATGTCTCTTGCAAATCGGTCGTATGATGGATCTTATGCTGATTCATGCCACTGGGCAGATGGGATTCCTCTGAATCTGCGGCTTTATGAAATGCTTTTGCAATCATGCTTTGATGCTAATGATGAATCGTCTATTATTGAGGAATTTGATGAGCTGATGGAACAAATCAAGAAGACCTGGGGTATCCTTGGGTTAAATCAGACGTTGCATAATCTTTGTTTCACTTGGGTTTTGTTTCACCGGTTTGTTGTGACTGGCCAGGTGGATTTGGAACTGCTATCTGCTGCTGATGGCCAGCTGGCAGAAGTTGCAAAAGATGCTAAGACAACAAAAGATGCGGAATATTCCAAAGTTTTGAGCTCTACGTTGACTTCTATATTGGGGTGGGCTGAGAAAAGGCTCCTTGCATATCATGAAACTTTTGACCGGGGTAATGTTGAAACCATGCAGGGCATAGTCTCTTTAGGGGTAGCCGCAGCTAAGATTTTGGTTGAGGATATATCCAATGAGTATCGCCGGAGGAGAAGAAATGATGTCAATGTGGCACGTGAAAGAATTGAAACCTACATTAGGTCATCACTACGCACTGCTTTTGCCCAGGCAAGTTCATCTGTTAGCCGTTGGTTTTTCCATTCAATAATGGAGAAGGCAGACTCCAGCAGGAGAGCATCCAAAAATCAGCCAAATGCTCTCCCTGTCCTTGCCATCCTTGCGAAGGATGTAGGTAGCCTGGCAACCAATGAAAAACAAGTCTTCAGTCCAATACTTAAGAGGTGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCCACCCTTCACTCATGCTATGGAAACGAATTAAAGCAGTTCGTATCAGGTATCGCAGAATTGACACCTGATGCGGTTCAAGTGTTGAGAGCTGCCGATCAGTTAGAGAAAGACCTTGTGCTGATAGCTGTGGAGGATTCAGTGGAAAGCGATGATGGTGGTAAAGCAATTATCCGTGAGATGCCTCCTTATGAGGCTGAAGGGGCAATTGCTAACCTTGTGAAAATATGGATTAAAACTAGAATAGACAGACTAAAGGAGTGGGTCGATAGGAATCTGCAGCAAGAGGTTTGGAGTCCTCAAGCAAATCAGGAAGGATATGCTCCATCTGCTGTTGATGTTTTACGGATTATAAATGAGACATTGGATGCTTTCTTTCAGCTTCCGATACCCATGCATCCTGCAATGCTTCCTGAAGTGATGAATGGCCTTGACAAATGCCTTCAGTATTATGTCATCAAAGCAAAATCTGGCTGTGGATCACGAAACACGTTTCTTCCAACAATGCCAGCGTTGACCAGGTGCACTATCGGTTCAAAGTTTCAGGGCTTTGGGAAGAAAAAAGATAAATCTCCAAATCCTCAGAAGAGAAACCCTCAGGTTGCAACAAATGGGGATAGCTCTTCTGGAATACCACAACTCTGTGTTCGCATTAATACTTTGCAATGGATCCTGGGTGAGTTTGATGTTCTGGAAAAAAGAATAATTACCCTTCTACGGAACTCTGAATCTGCTCATGTGGAAGATTTTTCAAATGGATTAGCAAAGAAGTTTGAACTATCTCCAGCTGCGTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCTGCAGCCTATAGAGTTGTCTTTCATGATCTAAGCCATGTTTTATTGGATGGTTTGTACGTTGGGGATCCAGCATCTTCAAGAATTGAGCCATACCTTCAGGAACTTGAACGGAAATTAATGTTCATTTCAGATACTGTTCATGAAAGAATTCGCACACGAATTGTTACTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGTCCCTCCCGTGCTTTTAACCGGAAGGATTCTCAGATCATCGAGGATGATTTCAAATTTCTGAAGGAACTGTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGATAAGTTTTCAACAACTGCGAGGTCTATCCTTCCCCTTTTCAGAACTGACACAGAGACCCTCATAGAGCAGTTTAGACGGTTGACCATGGAGACATATAAATCCTCCGCCAGGTCTAAACTTCCATTACCTCCCACTTCAGGACAGTGGAATCCGTCAGAACCAAACACATTGTTACGTGTTTTATGTTATAGAAATGATGAATCAGCTTCCAAGTTTCTGAAAAAGGCATATGATCTACCTAAGAAACTTTGA 2997 0.4611 MAHLFRDLSLGHSKRDTTPPTIMPPKPSALSSADDLPSPLGQLAANLSDSDLSLTAFEIFVAACRTSSGKPLSSIPNHSSANSPGQNSPNSQALQRSITSTAASKVKKAFGLKSPGSGSRKSPGSGSTSGSGQGKPKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKASDFTDQQEYVEWQKRTLKVLEAGLILHPQIPLDKSNSAAPRLRQIIHAALDKPIETGKNTESMQVLRSAVMSLANRSYDGSYADSCHWADGIPLNLRLYEMLLQSCFDANDESSIIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHRFVVTGQVDLELLSAADGQLAEVAKDAKTTKDAEYSKVLSSTLTSILGWAEKRLLAYHETFDRGNVETMQGIVSLGVAAAKILVEDISNEYRRRRRNDVNVARERIETYIRSSLRTAFAQASSSVSRWFFHSIMEKADSSRRASKNQPNALPVLAILAKDVGSLATNEKQVFSPILKRWHPLAAGLAVATLHSCYGNELKQFVSGIAELTPDAVQVLRAADQLEKDLVLIAVEDSVESDDGGKAIIREMPPYEAEGAIANLVKIWIKTRIDRLKEWVDRNLQQEVWSPQANQEGYAPSAVDVLRIINETLDAFFQLPIPMHPAMLPEVMNGLDKCLQYYVIKAKSGCGSRNTFLPTMPALTRCTIGSKFQGFGKKKDKSPNPQKRNPQVATNGDSSSGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHVEDFSNGLAKKFELSPAACLEGIQQLCEAAAYRVVFHDLSHVLLDGLYVGDPASSRIEPYLQELERKLMFISDTVHERIRTRIVTEIMRASFDGFLLVLLAGGPSRAFNRKDSQIIEDDFKFLKELFWANGDGLPSELIDKFSTTARSILPLFRTDTETLIEQFRRLTMETYKSSARSKLPLPPTSGQWNPSEPNTLLRVLCYRNDESASKFLKKAYDLPKKL 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02726 998 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 555 698 IPR014770 -
Vimu10g02726 998 MobiDBLite consensus disorder prediction 68 143 - -
Vimu10g02726 998 PANTHER PROTEIN UNC-13 HOMOLOG 30 996 IPR008528 -
Vimu10g02726 998 MobiDBLite consensus disorder prediction 712 737 - -
Vimu10g02726 998 MobiDBLite consensus disorder prediction 118 135 - -
Vimu10g02726 998 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 829 939 IPR014772 -
Vimu10g02726 998 MobiDBLite consensus disorder prediction 68 104 - -
Vimu10g02726 998 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02726 Vimu-Chr10 38643418 38647747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02726 - - gmx:100814675 1791.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02726 10 38643418 38647747 Vimu10g02726 10 38643418 38647747 ECH