Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02723 ATGGAATCCCATGCCTCCAATTCAAATTCTCATCCTAACCATAATAACAACCACCACCACCACCCGCCTAGGTTCAAACCCAGCCAACCCATCTCCGACCGAATAGTCCGTGCCCTCCGCCACCGTCTCCGCCTCCTCCACCGTGCCGGCTCCACCTTCTTCATATTCGGTGCCACCGGTAACGTCTACACGGTCACCCTCTCCTCCACCCCCTCCTGCACCTGCCCTGATCGTACAACCCCATGCAAGCACATTCTCTTTGTTTTCATTCGAGTTCTGGGCGTGTCCCTTGATGATGTCTGTCTAAGGAGGAGGACCCTTCGTCCCTGCCAGCTCCAACGCCTCCTCGGCAAGCCCACGTTGCCGGAGGCAGTGGCGGGAGGCACCCTCCGGCAGAGGTTCCACCAACTGTTCTTCGGTGGAGGGTCAAGGAGGCCAAAGATAGAGACGGAGGAGGGTGCGACGTGCCCGGTTTGCCTTGAGGAAATGGAGAAGGAGCAAAAGCTGGTTGCATGTGGAACATGTCGTAACCCTGTTCATGAAGAGTGCTTGATGAGGTGGAAGAGAACAAGAGGAAGAAGATCGGCTAGTTGTGTGATTTGTAGAGCAAGGTGGAGGGATACGGCGGAGCAGGATCAGTATCTGAACCTTTCTGCGTATGTTAGTGAAGATGACATCGGAGAACCTGCTGGGGGGCTCTGCACTGGCTGA 711 0.5584 MESHASNSNSHPNHNNNHHHHPPRFKPSQPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLGKPTLPEAVAGGTLRQRFHQLFFGGGSRRPKIETEEGATCPVCLEEMEKEQKLVACGTCRNPVHEECLMRWKRTRGRRSASCVICRARWRDTAEQDQYLNLSAYVSEDDIGEPAGGLCTG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02723 236 ProSiteProfiles Zinc finger RING-type profile. 156 202 IPR001841 -
Vimu10g02723 236 Pfam Ring finger domain 155 202 IPR001841 -
Vimu10g02723 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 219 IPR013083 -
Vimu10g02723 236 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 13 211 IPR039903 GO:0061630
Vimu10g02723 236 ProSiteProfiles Zinc finger SWIM-type profile. 63 93 IPR007527 GO:0008270
Vimu10g02723 236 MobiDBLite consensus disorder prediction 1 29 - -
Vimu10g02723 236 ProSiteProfiles Zinc finger RING-CH-type profile. 148 208 IPR011016 GO:0008270
Vimu10g02723 236 Pfam SWIM zinc finger 63 91 IPR007527 GO:0008270
Vimu10g02723 236 SUPERFAMILY RING/U-box 147 208 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02723 - - var:108321788 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02723 10 38633718 38637894 Vimu10g02723 10 38633718 38637894 ECH