Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02722 ATGTTCTCTTCAATCCTAAATTCTAATCAACCTCGGGATAAGCAACAAGAGAAACAAAAGGGAGAATGGTTCGCAGGGAGCTTCAAGGCAGAGAACTTCATTCCGGGTCTTGTTATAGGTTTCATTTTTGGGTTGTTGTTAGATTTAACAAAGCCCAGTAGAAATCACTTGTCCAAGAAACAATTGTCATCTACCAAGCTTCAAGAGCAACTCTCAGTCTCCAGCAATGGTGACCGAGAACTTAAAATGGTTCTGGTCGTTCGACAAGACTTGAAGATGAAATCTGGAAAGATTGCATCTCAATGTGCTCATGCTGCAACTGGCATGTATGCTGAGTTAATGCAAAGTGATAGGTCTCTTCTGAGACAATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGTAGGAATCAACAAGAGATGAATAAACTGAAGGACGCAGCTGAGAGTATTGGCCTTCCTACATTTGTTGTTGCTGACGCAGGAAGAACACAGGTTTCGGCAGGATCAAAAACTGTTCTTGCTGTTGGACCTGGTAAGCTTCCTGTTGCCTGTATGTCATGTGAGACCAAAATCACGTGCAAGAAAATCCAAATGCTTCTGCAGTTAATTGAACAATTGAATGTCACAGTCTTGGATTTGATGCTGATGACCAAAATCATCTGTGGACGCGGTGACTGGTAG 687 0.4265 MFSSILNSNQPRDKQQEKQKGEWFAGSFKAENFIPGLVIGFIFGLLLDLTKPSRNHLSKKQLSSTKLQEQLSVSSNGDRELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKDAAESIGLPTFVVADAGRTQVSAGSKTVLAVGPGKLPVACMSCETKITCKKIQMLLQLIEQLNVTVLDLMLMTKIICGRGDW 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02722 228 MobiDBLite consensus disorder prediction 1 21 - -
Vimu10g02722 228 CDD PTH2 82 181 IPR002833 GO:0004045
Vimu10g02722 228 SUPERFAMILY Peptidyl-tRNA hydrolase II 80 180 IPR023476 -
Vimu10g02722 228 PANTHER PEPTIDYL-TRNA HYDROLASE 2 14 181 IPR002833 GO:0004045
Vimu10g02722 228 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 79 194 - -
Vimu10g02722 228 NCBIfam aminoacyl-tRNA hydrolase 81 181 IPR002833 GO:0004045
Vimu10g02722 228 Pfam Peptidyl-tRNA hydrolase PTH2 81 181 IPR002833 GO:0004045
Vimu10g02722 228 Gene3D Bit1 76 187 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02722 Vimu-Chr10 38630192 38632718 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02722 K04794 - gmx:100527852 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02722 10 38630192 38632718 Vimu10g02722 10 38630192 38632718 ECH