Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02712 ATGGCCCCGAACCAATTTAGCAGCGACATGAATGGTGGTTTTGAAAGCAGTGGGTGTGATGTAAGCTTAGAAGGCAAGAATGAAGTGGCGACGGAGAATGCGAAATGCGAGTGTTGTGGAATGTGTGAGGAGTGCAGCGAGGAGTACATAGGGCGCGTGCGTGAGATGTTCTTGGGGAAGATGATATGCGGATTGTGCGCTGAAGCTGTGGATGTGGAGATGGAGAAGAATGGTGGGAGAAGAGAAAAGGGTTTGGAAGAGCACATGAATGATTGTGTAAGGTTTAACTGGCTTGGTAGGTCGTATCCTGCTTTGTATCAAGCTGAAGACGTGAAGGAGATCTTGAAGAAGACTTTAAGATGCAGACCCATGTCCACCAAGGATTAG 387 0.478 MAPNQFSSDMNGGFESSGCDVSLEGKNEVATENAKCECCGMCEECSEEYIGRVREMFLGKMICGLCAEAVDVEMEKNGGRREKGLEEHMNDCVRFNWLGRSYPALYQAEDVKEILKKTLRCRPMSTKD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02712 128 PANTHER OS01G0745000 PROTEIN 27 119 IPR012876 -
Vimu10g02712 128 Pfam Protein of unknown function (DUF1677) 32 117 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02712 Vimu-Chr10 38536323 38536840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02712 - - vra:106760378 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02712 10 38536323 38536840 Vimu10g02712 10 38536323 38536840 ECH