Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02711 ATGGCGCAATCTAAACCGTCAGATATCGGGGCCCACAAAACAAACGGATCTGGGACAAGTATAAATAAACACCCTACTACGTCAAAACAGATTGCGCTTGCATTGTGGTGTGTAGCGGTTTTCTGTTCCTGTTATCTGTGTTACGAGTCCGTGTCTGTTTCCGAAATCGTCGCCGTCGCAGGGGGCGATGTCTTCCGCCGAGACGGAGATGGAGCCTCTCACGTCGGGGGCGAGCAACCGCATAATTCCGCTCCTCAAGGCTCTCAGGGCTTCGCTCATCTTCGTCTACACCTTCTTCCTCTCCTTCCTCTTCTTCATCCTCCCCCGCCGCCGCCGCCTCTCCTCAACGGCGGGGCCGCCATCACCCAAGAAGCATTTGAGGCGGCGCTGGCTCGTGCGCGAGGAGGAGGACACGTGCCGGCGGAGAGCCTTGGCGCAGGACTACCTGGGAATGGGTCGCGACGAAGGCTGGTGCCGGTGGAGCACTTCCATTTTCTATGGGATAACAAGAAGTATCGCCCATACCCTCCCAATTATCTGACATATTACTCATTTTTCAGCGGAAGATATGCGGACTTTGCGAGGCAATTAACATCATGCAACTTTGCTGTCTATGCAATGGACTGGATAGGTCATGGAGGCAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGACACAGGGGCTTTCCTAGAAAAGATCAGATCGGATAATCCTGGAATACCATGCTTTCTCTTTGGTCACTCCACTGGGGGAGCTGTGGTCTTGAAAGCTGCTTCCCATCCTCATATTGAAGTAATGGTGGAAGGAATTATATTAACCTCGCCAGCTTTAGGTGTGAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCAATTTTTTCTCTGGTGGCTCCAAGGTTCCAATTCAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCGAGGGATCCAGCAGCGTTGTTGGCGAAGTACACAGATCCTTTGGTGTACACAGGACCTATAAGGGTACGAACTGGGCATGAAATACTACGGATATCCTCGTACTTAATGCGAAACTTCAACTCCGTGACTGTACCATTCTTTGTTCTGCACGGCACTGCTGATAAGGTAACTGATCCACTGGCCTCACAAGATCTGTATGACAAAGCAGCTTCAAAGTTCAAAGACATAAAGCTGTATGACGGTTTTTTACACGACCTTCTGTTTGAGCCTGAGCGTGAAGAGATTGCTCAGGACATTATCAACTGGATGGAAAAGAAACTATTCACTATCTGA 1290 0.4977 MAQSKPSDIGAHKTNGSGTSINKHPTTSKQIALALWCVAVFCSCYLCYESVSVSEIVAVAGGDVFRRDGDGASHVGGEQPHNSAPQGSQGFAHLRLHLLPLLPLLHPPPPPPPLLNGGAAITQEAFEAALARARGGGHVPAESLGAGLPGNGSRRRLVPVEHFHFLWDNKKYRPYPPNYLTYYSFFSGRYADFARQLTSCNFAVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSDNPGIPCFLFGHSTGGAVVLKAASHPHIEVMVEGIILTSPALGVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYTDPLVYTGPIRVRTGHEILRISSYLMRNFNSVTVPFFVLHGTADKVTDPLASQDLYDKAASKFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKKLFTI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02711 429 MobiDBLite consensus disorder prediction 1 23 - -
Vimu10g02711 429 PANTHER PHOSPHOLIPASE-RELATED 187 424 - -
Vimu10g02711 429 Pfam Serine aminopeptidase, S33 187 410 IPR022742 -
Vimu10g02711 429 Gene3D alpha/beta hydrolase 171 426 IPR029058 -
Vimu10g02711 429 SUPERFAMILY alpha/beta-Hydrolases 185 426 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02711 Vimu-Chr10 38522011 38525570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02711 105 426 Acyl Lipid Metabolism Gene Families AT1G73480 50.755 5.26e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02711 - - gmx:100816265 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02711 10 38522011 38525570 Vimu10g02711 10 38522011 38525570 ECH