Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02689 ATGTTCTCAATTGCAGCTATCAATGACACTGACTCCAAAACTAAGTGGGAGCCACTAGCTCCGACGAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCACGACGGGCTTCTCAAGTTACAAGCAAAAGAGTACGAGAAGTCTCGCGAGCTCTTGGAATCTGTTCTTAAAGACCCTCTTATTGCTAATGCTCAGGTGAATAGCACTGCCAGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCTGTTGTATTTCTTAAGCAAGGCTCCACATTTTATGAGAATGCTTTACGCTGTTATCTTCAAGCCGTGGAGATCGATTCTAAAGATTCTGTTGTTTGGAACCAGCTTGGTACATTATCATGCTCAATGGGCTCGCTAAGTATTTCACGTTGGGCATTTGAGCAAGGCCTGTTGTGTAGCCCTAATAACTGGAATTGCATGGAGAAGCTTTTGGAAGTTCTTATTGCAATTGGCGACGAGGTTGCTTGCCTTTCTGTTGCTGAATTGATTTTGAGGCACTGGCCATCACATGCTCGTGCTTTGTATGTTAAAAGTACCATTGAAGAATCAGAAATTTTACCATTTGCTCCAAGAGGCATAGACAAATTGGAACCTAAACATGTGCGACTCAAATTTCCTGACAAGAGAAAAACTTCTAATGACAATGCAGATGAGGATGTTGCATTCAAAAAGCTTAAACAGAATAAAGAACTTCACCTGACAGAAGTTTCCTGGGTGGCTCTTGCTGATGCACTCCTGGAAATCTTATCACCACAAAGTGATATAGATCCTGAAAAGGCGTTAACTTCTCCTGATATTAAGCTAAGCATAAACTTACCACATAGCTCAGAAGCTGTTTTGAACACTGTGGAAATGAAAGGGTCCAATGTTGATAATAGTGTTTTTGGTGATGGTAACATAGAACAATCAAGTGCTTTTAAAGAGAAAGAAGCAAACACTCAAGAAGAGCAGCCACATGAAAGGAGAAGTTCACGACTTGAAAGGCTCCGGAGTCGTAAACCAGGGAAAGAAGAATCTGATTCTTCTTATGGCAAGGACCCTACTAAGGTTGTCATTCAATATCTAGAGCCATTTATTGCAGGTGGATTGGATGGTCAAAATACAATTGATAGAGAGACCACAAGTCTACCTTGTTTAGGAAATTCTGAATATTATAATGTTTCTGCATTTGTTAGAGAGACCTCAAACAATTATGGTGCTTATCATATGGGGCACCTTCTTTTAGAAGAGGTTGCAAAACAAGGTCTCACATACCAGGATGCTTTTGTCAGATTTCTGGAGTTGGAAAAGTTGACTAGGCACTGGGGAAAAGAGAGAACTGCTGAATGTAATGTTTTCCTTGCTGAGTTGTATTATGATTTTGGATCATGCTCTCCCATTGGTTCTAATCAGTCAGAATTTATTTCTGAGACATCTTACCATCTTTGTAAGATCATAGAATCTGTAGCTTTAGATTACCCTTTTCACTTTACTAATGCCTTGAATGAAGGTTGTTTTTTGATTGATAGCATCCAGGAGACCAGTGTAAAAACAATAGATACCTCAATGACAAGCAATTTAAATTTAGACAGCTCACTTTTGATGAAAAAGAGTTCTCTTTGGGCTCGATTTTTCTGGCTAAGTGGGAGATTGTCTATTGTTGATGGCAACATGGCAAAAGCTTGTGAAGAGTTCTGTATTGCTTTGTCACTTTTGGCCAAGAGAGAAAATGTGGAAGATTCCCTCTGTTCAGTCTCCCGTCCACATTGCAAGGCTGTAAAAGAACTAAACTTTGATAGAGTTCTTGATGAAATTAATATATTGAAGGTCAATTTCTTGATGGAGAGTTCTGTCATTAAGATGATGGAGCATGAAAAGTATTTGGAGTGTGTATCCGTGCTTTCTCCACTTCTATTCTGCATGCGGGATGTCTACCCTGATTCATTCCCTTTATCCATGGCAGATAAAAAGGATGAAAAGATAACTTCCACTGAGCTCATGGCTGTAGATGTTCTAATGGAAGCATGCCAAAAGACAAAGCCAATGGATGTGGAGATGTATTTCAATTGTCATTATAGGAAGCTGAAAATACTTATGACAAAGATGGGTTTAAGTACATGTATTAAATCATTCAAATCCTCTGATCAAGCACCTCATTTAAATGCATCTCCTAATTTTGATATTGATTCAAGGGAAAGTCCTAGTAAGCACTGTAGTCACTGGGTTGTGGATGAAGTGAAGGCACTTTCTGACTGTATCTCACAAGTGAAGAAAATTATTGATCAACGTGGAGATTCTGGTGGCCTTTCTGTTCCAAAAAGTAGCATTTCGCAAATGCAATCTCTGCTGTTGTTAATCATGAGCTATGTTGCCAGCATACTGGTCTTCAATAAAGCTTCAGCAGAAGAACTTTCAGATCAGGCTGAAAGCAGATGTTTTGTTGATGCAGTTGTTGTTTTCTGCAAACTCCAGCATCTTAGCCCAACCACACCCATCAAAACTCAAGTTAGCTATCTTATTCTTGGAATAGTTGTTGATTTAATTGTTGCAACACATGACCTGCTTGCTGAATATGGGCTTTGCTGTTTGGGTGAAGGTGGAAAAGGTGAAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTTTTGGCCTTGGATATGAAGCTTAAATCTAGCTTTAGCCATAAAGATTCAATGCAATGTGAAGAAGTGTCCAAAAATAGTCTTGTCAATGTGTCTCTGGAAGAATCAAAATCAGACACATTAGGCATCCAGATGGACTGGACCAAAATTGATGAAATTAATTCAGTTAAAAAGGATGTTTCTGAAGGAGTAATATCCAAAGATATATTCTCATGCAGAATTCATGATAAAGACAGCAAGGAAGTAGAGTGTGAAAATCATGGAGGTGCTGGCACTGACAGTAAGTTAATTATGGTTGAAAATTCAAGCAATCAATCAATTGAATGTGGAAATGAACTTTCTGAAGATGAACGGGAGGAACTTGAGTCTAAAATTGATTGTGCTTTAGATCAGTGCTTTTTCTGTTTATATGGATTACATCTAAGATCTGATTCATCGTATGAGGATGATCTAGTCATGCACAAAAACACAAGCCGAGGAGATTATCAAACTAAAGAACAATGTGCTGATGTTTTTAAGTATGTTCTTCCATATGCAAAGTCATCCTCTAGGACGGGACTGGTCAAACTTCGTAGAGTTTTAAGAGCTATCAGGAAGCACTTTCTGCAGCCACCTGAGGACCTCTTGGAAGGAAACCCTATAGATAAGTTCCTAGATGATCCTAATCTATGTGAGGAAAAGCTCTCAGAGGAGGCTGGATCTGATGGATTTCTTGATTCTATTACGGAGAGAATGTTTCCTGATGTGGGTGGCATTGTTCAGTATAATGGAACATTGTTGAGAAGGTCTGAGCCATATTTGGAGGTCTACTGTAACTTGTATTATTTCTTGGCTCTGTCTGAGGAAATGAGTGCAACAGATAAGTGGCCTGGATTTGTTCTGACCAAGGAAGGGGAAGAATTTGTTCAACAAAATGCAAAGCTCTTCAAATATGATCTCATTTACAATCCTCTGCGCTTTGAAAGCTGGCAGAGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTGCTAAATGATGGTAGCAAGCATGTTAATGTAGTTGGCTGGAGGAAGAATGCTACCTTGTCCGAGAGAGTGGAAACAAGTAGAAGGAGGAGTAGACGTTGCCTACTAATGAGTTTAGCTTTAGCAAAGACATCTGCTCAACAGTGTGAGATACATGAGTTATTGGCGTTGGTATACTATGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCAGCGTGGATGACATTTTGTGAGAATTCAATGAAACATTTTAAGAAAGCCTTCACACTTAAGCAAGATTGGTTGCATGCCTTTTACTTGGGTAAACTCAGCGAAAAACTTGGATATTCACATGAAATTGCCATATCATATTACAATAAAGCTATTGGTTTGAACACATCAGCGGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAATTATTATTTAAGCATGGAAAGCAGAATTTTGAGATTTTGAAGGTTCTATCAGAAAACTCCTTTAATCAATCTGTAAAAGAAGCTGTAACAAGTATTCTTAGTGGTGTGGAAACAAACCATGAAGAGTTGCTCAAATTGGATACTGTATGGTCTATGCTTTACAATGATTGCCTTTCTGCTCTTGAAATGTGTGTGGAGGGGGATCTCAAACATTTTCATAAGGCCAGATACATGCTGGCACAAGGGCTATACAAAAGAGGTGAGAGTGGTGATATAGAGAGGGCAAAGGATCATCTATCTTTCTGCTTCAAATCTTCACGCTCATCGTTTACAATAAATATGTGGGAAATTGATAGCATGGTGAAAAAAGGAAGGCGTAAGACACCAGGTTCTGCTGGCAACAAAAAGGCCCTTGAGGTTAACTTACCAGAAAGTTCTCGAAAATTTATTACTTGCATTAGGAAGTATTTGCTGTTTTATCTCAAACTATTGGAGGAAACTGGAGATAGATGTATTCTTGAACGTTCGTATACTGCTCTTCGGGCAGATAAACGGTTTGATTGTATTGTAACATTATTTGTTTGTCTTTCATTTCTACCACAAGTGCAGTTTTCATTATGCATTGAAGATCTTATACCAGTGGCTATCGGTAGATATCTAAAGGCTCTGATTTCAACTATCTGCCATTCTCAGACTGCTGCCTCTGGTTCAGTGACCAGTTATGACAATGTGCTGGAGAGAATGTTTGCATTGTTCATGGAACAAGGGAGCCTATGGCCAGAGATATGCAGCTTGACTGAAATTGAAGGCTCGGATATGTCAGAGAGTATCATATATGGATATCTTCATGACTATATTGTATTATTGGAGAAAAATGGAAAACTGGAAACTCTTGAAACAATAAATGAGAAGATTCGGAAGCGTTCTAAGAATCCAAAGTTCTCTGACAGTAATTCTGCAGAAATTGGCAGGCATGCTTCTGTCGCTTGGTGCCGATCTCTTATATATAATTTGGCACAAATAACTCCATTATCATGTGCATTCTCAAATGGGATTCCGGTCCATAGTTTGACGGAAAGTGGGATGGATAATAGCCAGTTGCTCTGCATTGATTTGCAGCCAAATGAATTATGGAGTACAGCTTTTCAAGATCCAGCTCCTTTGGAAAAGATTGAAACAAGATGGAGCTCCATTTTAGGAAAAATAAAAAATATCATCATTAACAAAGCCTCTGATGAGAATTTGGAAACTGCAAACACTTTGCTCAGAGCATGCTATAATTTTTATCGGGAGAGTTCTTCAGTAGTGCTTACCTCCGGACTCAACTTTTATTTGATTCCATCACAATTAATTACACATATATCATTCAACCCAAGTACAGCTGGGATTGATGCACTTGATCTGAGCATACCAAGGAAGCTTCTCTTGTGGGCCTATGTTTTATCGCATGGACGATGTGCAAGTATCTCAATTGTTGTGAAGCATTGTGAAGAAATTTCGAAGTCAAAGATGAAAAGAGGAAGTGGAACGTCACCTGCGTTATCAAACACATCTCCTGCCCCTAATCTTTCAGGTAGCGGTAGAAACGGACCAATTTCTGGCGGAGGCATTGACTTTGATTCAACGCATGTCGCAACAGTGCCTAGCGGCAATACCACTAATGTTGTGAATTCACATTCCTCCGATGACGTTCAGAGGAATCTCTTTGCTTCTCCCCAGTTGCATCAATGCACCACTAACGACGCAGAAAGAAGCAATTTGATAGCACATGAAGGAGATGCAGAGGGAGATTGA 5919 0.3915 MFSIAAINDTDSKTKWEPLAPTKEAQEFHLSQTYHDGLLKLQAKEYEKSRELLESVLKDPLIANAQVNSTASDGHLLQLRFLALKNLAVVFLKQGSTFYENALRCYLQAVEIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHARALYVKSTIEESEILPFAPRGIDKLEPKHVRLKFPDKRKTSNDNADEDVAFKKLKQNKELHLTEVSWVALADALLEILSPQSDIDPEKALTSPDIKLSINLPHSSEAVLNTVEMKGSNVDNSVFGDGNIEQSSAFKEKEANTQEEQPHERRSSRLERLRSRKPGKEESDSSYGKDPTKVVIQYLEPFIAGGLDGQNTIDRETTSLPCLGNSEYYNVSAFVRETSNNYGAYHMGHLLLEEVAKQGLTYQDAFVRFLELEKLTRHWGKERTAECNVFLAELYYDFGSCSPIGSNQSEFISETSYHLCKIIESVALDYPFHFTNALNEGCFLIDSIQETSVKTIDTSMTSNLNLDSSLLMKKSSLWARFFWLSGRLSIVDGNMAKACEEFCIALSLLAKRENVEDSLCSVSRPHCKAVKELNFDRVLDEINILKVNFLMESSVIKMMEHEKYLECVSVLSPLLFCMRDVYPDSFPLSMADKKDEKITSTELMAVDVLMEACQKTKPMDVEMYFNCHYRKLKILMTKMGLSTCIKSFKSSDQAPHLNASPNFDIDSRESPSKHCSHWVVDEVKALSDCISQVKKIIDQRGDSGGLSVPKSSISQMQSLLLLIMSYVASILVFNKASAEELSDQAESRCFVDAVVVFCKLQHLSPTTPIKTQVSYLILGIVVDLIVATHDLLAEYGLCCLGEGGKGEEGTFLRFAIKHLLALDMKLKSSFSHKDSMQCEEVSKNSLVNVSLEESKSDTLGIQMDWTKIDEINSVKKDVSEGVISKDIFSCRIHDKDSKEVECENHGGAGTDSKLIMVENSSNQSIECGNELSEDEREELESKIDCALDQCFFCLYGLHLRSDSSYEDDLVMHKNTSRGDYQTKEQCADVFKYVLPYAKSSSRTGLVKLRRVLRAIRKHFLQPPEDLLEGNPIDKFLDDPNLCEEKLSEEAGSDGFLDSITERMFPDVGGIVQYNGTLLRRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVQQNAKLFKYDLIYNPLRFESWQRLGNIYDEEVDLLLNDGSKHVNVVGWRKNATLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMTFCENSMKHFKKAFTLKQDWLHAFYLGKLSEKLGYSHEIAISYYNKAIGLNTSAVDPVYRMHASRLKLLFKHGKQNFEILKVLSENSFNQSVKEAVTSILSGVETNHEELLKLDTVWSMLYNDCLSALEMCVEGDLKHFHKARYMLAQGLYKRGESGDIERAKDHLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPGSAGNKKALEVNLPESSRKFITCIRKYLLFYLKLLEETGDRCILERSYTALRADKRFDCIVTLFVCLSFLPQVQFSLCIEDLIPVAIGRYLKALISTICHSQTAASGSVTSYDNVLERMFALFMEQGSLWPEICSLTEIEGSDMSESIIYGYLHDYIVLLEKNGKLETLETINEKIRKRSKNPKFSDSNSAEIGRHASVAWCRSLIYNLAQITPLSCAFSNGIPVHSLTESGMDNSQLLCIDLQPNELWSTAFQDPAPLEKIETRWSSILGKIKNIIINKASDENLETANTLLRACYNFYRESSSVVLTSGLNFYLIPSQLITHISFNPSTAGIDALDLSIPRKLLLWAYVLSHGRCASISIVVKHCEEISKSKMKRGSGTSPALSNTSPAPNLSGSGRNGPISGGGIDFDSTHVATVPSGNTTNVVNSHSSDDVQRNLFASPQLHQCTTNDAERSNLIAHEGDAEGD 1972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02689 1972 MobiDBLite consensus disorder prediction 1919 1935 - -
Vimu10g02689 1972 MobiDBLite consensus disorder prediction 1880 1904 - -
Vimu10g02689 1972 Gene3D Tetratricopeptide repeat domain 6 197 IPR011990 GO:0005515
Vimu10g02689 1972 MobiDBLite consensus disorder prediction 320 359 - -
Vimu10g02689 1972 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1959 IPR033053 GO:0006325
Vimu10g02689 1972 MobiDBLite consensus disorder prediction 322 358 - -
Vimu10g02689 1972 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Vimu10g02689 1972 SUPERFAMILY TPR-like 34 169 IPR011990 GO:0005515
Vimu10g02689 1972 Coils Coil 992 1019 - -
Vimu10g02689 1972 MobiDBLite consensus disorder prediction 1878 1935 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02689 K17613 - gmx:100783154 3290.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02689 10 38328273 38341113 Vimu10g02689 10 38328273 38341113 ECH