Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02681 ATGGATCCTTGCCCTTTCGTCAGGCTCACCGTTGGCAACCTCGCCCTCAAAATTCCCGTTGCTTCCAAACCGGCGCGCTCTGTCGTTCACCCTTCTTCTTCCCCCTGTTTCTGCAAAATCAAGCTCAAGAGCTTCCCTCTACAGTCCGCCGTTGTTCCCTTCATCCCTCCCGATAACAACCTCCCCGACTCCCACGTCCATCCCATCGCTGCAACCTTCCACCTCAGCAAGTCTGATCTCGACAGGCTTGCTGGAAAATCCATCTTCGCAGGCAAGCTCTGCCTCAAAATCTCGATCTATACCGGCCGTAGAGGTACTACCTGTGGCGTCAACTCTGGGAGACTCCTCGGTAGAGTGTCTGTGCCTTTGGATCTCTCGGGAACGGTAGCGAAGACCACCGTGTTCCACAATGGCTGGATTAGGATAGGGAAAGACGCCAAAGGCTCTTCTGCGCAGTTCCATTTGAATGTAAAAGCCGAACCCGACCCCAGATTCGTCTTCCAGTTCGATGGCGAACCTGAATGCAGTCCCCAGGTTTTTCAGATCCAGGGCAACATCTCACAACCGGTTTTCACCTGCAAGTTCAGTTTCCGAAACACCGGCGATCGAAATCACCGTTCCAGGTCTTTACAGTCAGAGCAAGGAGGTTCTAGAAGCTGGTTGAGTTCGTTCGGAAGTGAGCGCGAGCGTCCGGGTAAAGAGCGCAAGGGATGGTCCATTACGGTTCACGACCTTTCCGGTTCGCCGGTTGCGGCAGCTTCCATGGTCACGCCTTTCGTCGCTTCGCCCGGTTCGGACCGGGTCAGCTGCTCCAATCCCGGTTCGTGGCTCATTCTTCGTCCCAGCGACGGTACTTGGAAGCCCTGGGGGAGACTCGAGGCGTGGCGTGAGCGCGGCGGCTCCGACGGCCTCGGCTACCGCTTCGAGCTCATACCGGACACCAACGGCGGCATGAGTGCCGCGGGCATAGTGCTTGCGGAGTCCACGCTGAGCACCTACAAAGGAGGAAAGTTTGTCATTGATATGGGTTGTCGCAGTGGAGTTAACAACGGCGGATCGAACGGCCGCGCCACGCCGGGGAGTGCAACATCGCCGGCGTGCAGCCCTAGGAGCAGCGGGGACTATGGGTACGGCCTCTGGCCATACTGTATGTATAGAGGTTTTGTGATGTCCGCGAGCGTGGAGGGCGAGGGGAGATGCAGCAAGCCTAAGGTGGAGGTTAGTGTGCCGCACGTGAACTGCGCGGAGGATGCGGCGGCGTTCGTAGCGCTAGCCGCCGCGGTGGATCTAAGCGTTGATGCCTGCAGGCTTTTCTCTCAACGGCTTAGGAAGGAGTTGTGCCAGCAGGTGGAATTGGTTGGGTGA 1365 0.5773 MDPCPFVRLTVGNLALKIPVASKPARSVVHPSSSPCFCKIKLKSFPLQSAVVPFIPPDNNLPDSHVHPIAATFHLSKSDLDRLAGKSIFAGKLCLKISIYTGRRGTTCGVNSGRLLGRVSVPLDLSGTVAKTTVFHNGWIRIGKDAKGSSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNTGDRNHRSRSLQSEQGGSRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPSDGTWKPWGRLEAWRERGGSDGLGYRFELIPDTNGGMSAAGIVLAESTLSTYKGGKFVIDMGCRSGVNNGGSNGRATPGSATSPACSPRSSGDYGYGLWPYCMYRGFVMSASVEGEGRCSKPKVEVSVPHVNCAEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQVELVG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02681 454 MobiDBLite consensus disorder prediction 201 237 - -
Vimu10g02681 454 PANTHER OS08G0163500 PROTEIN 1 449 IPR010410 -
Vimu10g02681 454 MobiDBLite consensus disorder prediction 210 224 - -
Vimu10g02681 454 Pfam Protein of unknown function (DUF1005) 1 447 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02681 Vimu-Chr10 38279982 38281679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02681 - - gmx:100805268 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02681 10 38279982 38281679 Vimu10g02681 10 38279982 38281679 ECH