Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02679 ATGAGGTTGAGGGAGAACGACGACGGTGGTGAGAAAGAGGAAGTGGTGGTGGAGAATGATGTCACCCTGGCCCAAAATCAATGGTGTCCGGTGGTCAATGCGGGGTTTTCGTCGCCCAAGAGACTGGTTGTGGTTGGTTATGCTCTTACTACTAAAAAGATAAAGAGCTTTTTACAGCCTAAGCTTGAAGGTTTAGCTAGGAACAAGGGAATACTATTCGTGGCTATTGACCATAATAGGCCCCTTTCAGATCAAGGTCCTTTTGATATTGTCTTGCATAAGTTATCAGGGAAAGAGTGGCGCCAGGTTCTTGAGGTTTGTCCCCACCCACCAGCCACCCCCTTTTCAGCGCGTGATTATAGGCAGTCACATCCTGAGGTTACAGTTTTGGACCCTCCAGATGCCATACAACATTTACGCAACCGTCAGTATATGCTTCAGGCTGTAGCAGATATGAACCTTTGTGATTCATATGGCATCGTGGGTGTTCCTCGGCAATTAGTTATCAAGAGAGAGGCATGCGCTATTCCAGAGTTGGTCAACCAAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTAGTTGCCGATGGAAGTGCAAAGTCACATGAATTATCCCTTGCTTATGAGAAGTTTTCCCTTCAAAAACTTGAACCTCCTCTTGTTCTTCAGGAATTTGTCAATCATGGGGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTAAGGCGGTTTTCATTACCTGATGTTAGCAAGTGGGAACTCTCCAAAGATGCTGGGATATATAATTTTCCAAGGGTTTCGTGTGCTGCAGCTTCTGCAGATGATGCAGATCTGGATCCTACCGTCGCTGAGCTTCCTCCAAGGCCATTACTAGAGAAATTAGCTAAGGAACTTCGGTGGCGATTGGGTCTTCGTCTATTCAACCTGGATATTATCCGTGAATATGGAACAAGAGATCACTTTTACGTCATCGACATAAATTACTTCCCTGGATATGGCAAAATGCCTGAGTATGAACACATATTTACTGATTTTCTGTTGAGCCTGGGGCAAGGGAAGTACAAGAAAAGATCAGGCTAA 1095 0.4493 MRLRENDDGGEKEEVVVENDVTLAQNQWCPVVNAGFSSPKRLVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVLEVCPHPPATPFSARDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLCDSYGIVGVPRQLVIKREACAIPELVNQAGLTLPLVAKPLVADGSAKSHELSLAYEKFSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSKDAGIYNFPRVSCAAASADDADLDPTVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKRSG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02679 364 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 40 358 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu10g02679 364 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 44 136 IPR041429 -
Vimu10g02679 364 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 132 338 - -
Vimu10g02679 364 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 157 352 IPR040464 -
Vimu10g02679 364 Gene3D - 132 336 - -
Vimu10g02679 364 FunFam Inositol-tetrakisphosphate 1-kinase 4 132 336 - -
Vimu10g02679 364 PIRSF ITPK 17 364 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02679 Vimu-Chr10 38266257 38271190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02679 K00913 - gmx:100127409 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02679 10 38266257 38271190 Vimu10g02679 10 38266257 38271190 ECH