Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02675 ATGCCACCCTCTGTGAAGGTCAAGTCGGAGGCTACGTTGGAGACTGTACAGGAGATTGCCGTCTATCTTCATAGGTTTCACAACCTTGACCTTTTTAAGCAGGGATGGTATCAGATTAAGATTACCGTGAGATGGGAGGACAGTGAAAACGTATGTTTCGGTATTCCAGCAAGTGTTGTTCAATATGAAGTTCCTCCTGATCTGGATCCTAGCAGCATATATGGCGTATGGAGGATTGATGACACAGATAACAGTTTCTCAACGCAGTCTTTTCGAATAAAATATGCTAGGCAGGATGTTCATTTGTATTTGATGATCGTGTTCAACTTACGTCGTAATAATTTGGTGGATTTAGCTACAACTGCTGTTATTTTAAAATTTGAGCTTATATACGCTCCCGTGACTGAGCAAGGTGTCGAATTGGACCTCTCTCTGGATGCTTCCTCTGCTGCTATCCATGAATTCCGAATACCTCCTAAAGCTCTTGTAGGATTGCACTCGTATTGTCCTGTCCATTTTGACGCTTTACATGCGGTGCTTGTTGACGTAAGTGTACATGCCAGTATACTAAAAGTTGCCACTCATTCATTTCCATCAAAGCTACCCAGCAATTCTGCCAACACTGAAGTCATTGCAGATAAAAGCAGCGACGCCTCGAATAAAGGCTCTGCCGTGCTTGTTAAAGTATTGTCAGCTTCTCGTGATATATTGCTTGAAGAACTACACAAAATTGGCAGAGCAATTAGTGAAGCTTTTGATTTTTCAGACTTTGAGTCAATAGTGAGTAATATGAAGCAAGAGAATCCATTAGCAAATGAAGTTGTAGGACAAGGCAAGCCACAATATGGTCGTAAGGGAGGAAATGAAGATCTAGATTTTCAGGATGTTGAAAAGCTTTGTTCCCTGTCCCAGAATGAGCTGATGGACTGTTTTCATTCGCTGGGAGATCAATTGTCCTATTTATGGAAAACATTTTTAAAGTTCCACAGGGATAACAAAACAAAGATTATGGGATTTTTACACGAGACATGGATTAGGGAGCGGAGAACGGAATGGTCAATATGGATGTTATATTCTAAGGTAGAAATGCCTCATCAGTATACAAACAGTAAGGGTGATGAGACTTCCCAGCGTGCCACCAAACGAGTGGCCAGTTTGTGGAAGTTACCTGATGATCCTATTCAGATTGCAGCCACACGTGCAGAACTTCATCGAAAGAGCATTGAACAAATGCGGATTAACAACCGCTCAATTCAAGACATGCAGATATTTGGAGATCCTTTGCGTACACCAATTGTGATTGTTGAACATGTGTTGAATGTACCGCGGCGTTTTCCAAGTGAAAATTCATTACTGAGACATATTGGGCATATGGATTGTGATGGCTTTCCACTTAACCTTTATGATAGTATAGGCAAGAAATCTGCACAACAAAGCAATGATCGTGTGTTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGCATGTCTTGTAGATTTTATTGCAAACTATATACTTTCTATTTTTAACGTAGGATTTGAGTTTGTTAGGTGTTTCTTTTTTTGGACGTTGGTGGCTTGA 1581 0.4073 MPPSVKVKSEATLETVQEIAVYLHRFHNLDLFKQGWYQIKITVRWEDSENVCFGIPASVVQYEVPPDLDPSSIYGVWRIDDTDNSFSTQSFRIKYARQDVHLYLMIVFNLRRNNLVDLATTAVILKFELIYAPVTEQGVELDLSLDASSAAIHEFRIPPKALVGLHSYCPVHFDALHAVLVDVSVHASILKVATHSFPSKLPSNSANTEVIADKSSDASNKGSAVLVKVLSASRDILLEELHKIGRAISEAFDFSDFESIVSNMKQENPLANEVVGQGKPQYGRKGGNEDLDFQDVEKLCSLSQNELMDCFHSLGDQLSYLWKTFLKFHRDNKTKIMGFLHETWIRERRTEWSIWMLYSKVEMPHQYTNSKGDETSQRATKRVASLWKLPDDPIQIAATRAELHRKSIEQMRINNRSIQDMQIFGDPLRTPIVIVEHVLNVPRRFPSENSLLRHIGHMDCDGFPLNLYDSIGKKSAQQSNDRVLKIVVFVHGFQACLVDFIANYILSIFNVGFEFVRCFFFWTLVA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02675 526 PANTHER UNCHARACTERIZED 149 506 IPR044294 -
Vimu10g02675 526 Pfam Protein FAM135 125 189 IPR022122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02675 Vimu-Chr10 38200304 38211056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02675 - - gmx:100785285 736.102