Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02647 ATGGCTTTGATATATGAACAATTCCGATCTTCACGATCTGGAAAGGAAGACATTCACACAAGACTGATGAAGAAATACAAGCCAATACCTAATTGGTGGTTTCATGTGACGCTTTTAGTTTCCTTTCTACTTGCACTTTTACTGTGTACTGTCATGAAAGATCAGGTACAGATGCCATGGTGGGGTCTCATCTTTGCAGCTGGCCTTGCACTTACTTTTACTCTCCCCATTAGCATCATAACGGCCACCACAAATCAGGTTATAGGGACTCTGATAGCAGGAACCGTGGATGTTGGTGTGGCCTGGTGGCTGTTAGGTTCAGTAAAGAATATATGCAAACAAGATTTACTGCCCGAAAACAGTCCATGGACGTGCCCTGGTGATCATGTTTTCTTTGATGCATCTGTGATCTGGGGTTTGGTTGGTCCAAAGAGGATTTTCGGTACTCAAGGAAAATACCAAAAGCTGAATTGGTTCTTCTTAATAGGAGCAGTGGGACCAGTTGTTATATGGGCACTCCAGAAAGTGTTTCCGAAACAACATTGGATATCCTTAATTCACCTTCCTGTACTTCTTGGAGCAACTGCAAGCATGCCACCGGCTAGCACAGTGAACTTCAATTCATGGATTGTTGTTGGCACAATCTTTAATTATTTTGTGTTCAAATATAGGAAGAATTGGTGGGAGCGGTATAATTATGTGCTAGCTGCAGCTTTGGACGCCGGATTGGCTTTCATGACTGTTCTTATATACTTTGCACTTTTGATGGAAGGTAAAGGCATTCAATGGTGGGGAACTGATGAGCACTGTCCACTGGCTGAATGTCCAACAGCAAAAGGTCTAATTGCTGAAGGCTGTCCTGTCTTTTGA 870 0.4299 MALIYEQFRSSRSGKEDIHTRLMKKYKPIPNWWFHVTLLVSFLLALLLCTVMKDQVQMPWWGLIFAAGLALTFTLPISIITATTNQVIGTLIAGTVDVGVAWWLLGSVKNICKQDLLPENSPWTCPGDHVFFDASVIWGLVGPKRIFGTQGKYQKLNWFFLIGAVGPVVIWALQKVFPKQHWISLIHLPVLLGATASMPPASTVNFNSWIVVGTIFNYFVFKYRKNWWERYNYVLAAALDAGLAFMTVLIYFALLMEGKGIQWWGTDEHCPLAECPTAKGLIAEGCPVF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02647 289 PANTHER ISP4 LIKE PROTEIN 86 288 IPR004648 GO:0055085
Vimu10g02647 289 NCBIfam OPT family oligopeptide transporter 86 254 IPR004813 GO:0035673
Vimu10g02647 289 Pfam OPT oligopeptide transporter protein 7 86 IPR004813 GO:0035673
Vimu10g02647 289 Pfam OPT oligopeptide transporter protein 86 253 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02647 Vimu-Chr10 37835571 37837115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02647 4 288 Organic Solute Cotransporters AT5G64410 51.297 1.86e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02647 - - gmx:100785973 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02647 10 37835571 37837115 Vimu10g02647 10 37835571 37837115 ECH