Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02640 ATGACTTTGACAAAGGAGGAAAATGACAAATTGCAGGGACTGGATTGCCATCAAGTAAGGATGTGGCTAGAAGCGACAAAACTGCAGGGACTGCCATCACTGACTGATGGGGCCTGTATGTTAACCACTGACTGTCCTTGGAGACCTTTCAGAATAGAGAAGAAGATAGCGGAAGCAATAGAGGTAGGACTAGGTGTTGATGCATCGGTGGCACAAGTGGCGGAGACGATGGCCACGAAAGTGGTCGGCGACGGTGGCTGGAGACGGTGGTCGAAGACGGTGCCGACGGCGGTGGCCGGTGATGGCGGTTGGCCAGTGACGGACAACCGCCAACAGGTGGTGGCTGGTGGCAAGCGGCAACGGGCAGTGGCGGACAGCAACACCGGACAGATAGACTTTTTAGGGGGGCCGCGGGTGGCGGCGGCCACCGGCGGAAACAAAGACAAATTAGAAAAGGATCAGAAAACCTGCTCTGATACCAAGTTGAATATATTCTTATCTGTTTATGACCTTTCGGTCATGTACGGTCTTGAAGTGCTCAGTCATGGACTAGAACTCAGTATCAGTAGTGCTCGGTCTTATACTGGCACTCGGTCCCTTCCTATAGTCAATAGTGTTCGGCCTAAGTTTCAAGCGTTCATCTCATGCGGAGTGTTCTCCCGTTCGGTATTGTATAAAGATTCTGTAATCTCTTCTTCCCAGTCTTGTTCAAAGGATAATTGTAAGATGGATATTGAAGGGAATTCCAAGGAGGAATGTCTCATGGGACAACTTAGTATTGGCGTTCATCCTAACATTCTAATGATCACCGAGTCTCAAGTAGAGAATGGTGATGCATGTGACCTTGACCTAAGGTGTTTTAATGGGCTAACCTCGTGTGGCAAGCTCAAGGGTTTTCCATGTTGCGTTAATACTGATGGGTGTGAGCAAAGGGTGTTGAAGGTACGTTGGAGCAAGCGCTCGAAAGAGAAGGCAGCTTCTTCTAGAGGCGATGAATTAAGACGATATCGTGTTCGCATGAGCAGAAATGCACAGACGGATTTGAAGAAGAATGTGGTTGATGAAGAGACGGAGAAAGGGACGCAGTGGATAGAAAGTGAGTGGTGCGGAAGAGAGAGAGGAAGACGAAGAAGGATCGTTTGTAGTTGGATTCCACTGAATGGTTATGGGAGTGAGAGCGGGAAAAGTGAAACAAGTGAAGGCGAAGCCAATGACTCGGTGACTTTCGGAGATATAATATTTATCAAGCTTCGCGGTAGCTCATGGTGGCCTGCTCAGGTAGTTGATGAAAATAGTGTTAACAAGAGTGTTAAGCCAAGCAAACGGAGCAAGCGATCGCCCGGGGACATCCTTGTTAGGCATTATGGAAGTTACATATAG 1380 0.4848 MTLTKEENDKLQGLDCHQVRMWLEATKLQGLPSLTDGACMLTTDCPWRPFRIEKKIAEAIEVGLGVDASVAQVAETMATKVVGDGGWRRWSKTVPTAVAGDGGWPVTDNRQQVVAGGKRQRAVADSNTGQIDFLGGPRVAAATGGNKDKLEKDQKTCSDTKLNIFLSVYDLSVMYGLEVLSHGLELSISSARSYTGTRSLPIVNSVRPKFQAFISCGVFSRSVLYKDSVISSSQSCSKDNCKMDIEGNSKEECLMGQLSIGVHPNILMITESQVENGDACDLDLRCFNGLTSCGKLKGFPCCVNTDGCEQRVLKVRWSKRSKEKAASSRGDELRRYRVRMSRNAQTDLKKNVVDEETEKGTQWIESEWCGRERGRRRRIVCSWIPLNGYGSESGKSETSEGEANDSVTFGDIIFIKLRGSSWWPAQVVDENSVNKSVKPSKRSKRSPGDILVRHYGSYI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02640 459 Gene3D - 400 459 - -
Vimu10g02640 459 Pfam PWWP domain 410 456 IPR000313 -
Vimu10g02640 459 ProSiteProfiles PWWP domain profile. 409 459 IPR000313 -
Vimu10g02640 459 CDD PWWP 410 458 - -
Vimu10g02640 459 SUPERFAMILY Tudor/PWWP/MBT 407 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02640 Vimu-Chr10 37774484 37784122 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02640 - - gmx:100787568 104.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02640 10 37774484 37784122 Vimu10g02640 10 37774484 37784122 ECH