Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02597 ATGGCTTCCAATTCCGATTTGGTGCGCGCCGTTGAGTCGTTCCTTGGCGTTTCTCTCGGAGATTCCGTTTCGGATTCGCTGCTTGTCATCGCCACCACCTCCGCGGCGGTTGTAATCGGTCTTCTCGTGTTTTTATGGAAGAAATCTTCGGATCGGAGCAAGGAGGTGAAGCCGGTGGTTGTGCCGAGGGATTTAATGATGATGGAGGAGGAGGAAGTTGACGTTGCCGCCGGCAAGACTAAGGTCACCATTTTCTTCGGTACTCAGACCGGTACTGCTGAAGGCTTTGCTAAGCAACATGTCTTCATACCTCTTTCTTGGCTAGCTGTTCCTGTAACTGTAACAACATCTCTTCATAGAGATGATGCCTACTTCCTCTTTTCTATAATGCTTGAAATGGCGTTGGCAGAGGAGATCAAGGCAAGGTATGAAAAAGCGGCTGTCAAAGTTGTTGACCTGGATGACTATGCAGCCGATGATGATCTATATGAGGAGAAGCTGAAGAAAGAGAGTCTTGTATTTTTCATGCTAGCAACTTATGGGGATGGAGAACCAACAGACAATGCTGCAAGATTCTACAAATGGTTTACTGAGGGGAAAGACGAGAGGGGAATCTGGCTTCAAAAACTCACCTATGGAGTTTTCGGCCTAGGTAACAGGCAATACGAACATTTTAATAAGATAGGTAAAGTTGTGGATGAAGAACTTGCTGAACAAGGTGCAAAGCGTCTAGTTGCAGTTGGATTAGGTGATGATGATCAATCCATTGAAGATGATTTTTCTGCCTGGAAAGAAAGTTTATGGTCTGAGTTGGATCAGTTGCTCAGAGATGAGGATGATGCTAATACTGTCTCTACCCCCTATACAGCTGCTATTCTTGAATACCGAGTAGTGATTCATGATCCCACTGCAACATCAACTTATGATAATAACTCAACCGTGGCAAATGGGAATACTGTGTTTGATATTCATCATCCTTGCAGGGTGAATGTTTCTGTACAAAAGGAGCTTCACAAACCTGAGTCTGATCGTTCTTGCATACATTTGGAATTTGATATATCAGGGACGAGCATAACATATGATACTGGAGACCATGTGGGTGTTTATGCTGAGAACTGCAATGAAACTGTCGAAGAAACTGGGAAGTTGTTGGGTCAGAATTTGGATCTATTTTTTTCTCTTCACACAGACAAGGATGATGGCACTTCCCTAGGTGGTTCTCTCCTACCTCCTTTCCCAGGCCCTTGTTCACTGCGAACTGCATTAGCACGTTATGCTGATCTCTTGAACCCCCCACGAAAGGCTGCTTTAGTTGCATTAGCTGCTCATGCCTCTGAACCTAGCGAAGCGGAAAGATTAAAGTTCCTTTCATCTCCTCAGGGGAAGGATGAGTATTCCAAATGGGTGGTTGGAAGCCAGAGGAGTCTCGTTGAGGTGATGGCTGAGTTTCCATCAGCAAAACCTCCTCTTGGTGTGTTTTTTGCTGCAATAGCCCCTCGTTTACAGCCTCGTTATTATTCTATTTCATCCTCTCCAAGGTTTGCTCCTCAAAGGGTACATGTAACTTGTGCTTTGGTGTATGGTCCAACTCCCACTGGTAGAATTCACAAAGGTGTATGTTCAACTTGGATGAAGAATGCTATTCCCTCAGAAAAAAGTCAAGACTGTAGCTCGGCTCCTATTTTTATTAGGCCATCAAATTTCAAGCTTCCAGTTGATCATTCAATACCTATTATTATGGTTGGACCTGGTACCGGTCTTGCACCTTTCAGGGGATTTTTACAGGAAAGATATGCTCTCAAAGAGGATGGTGTTCAACTTGGCCCTGCATTACTCTTCTTTGGATGTAGAAATCGTCAAATGGATTTCATTTACGAGGATGAGCTAAAGAGTTTTGTGGAACAAGGTTCTCTTTCAGAATTGATAGTTGCATTCTCTAGAGAGGGGGCTGAAAAGGAATATGTTCAACACAAGATGATGGACAAAGCTGCGCACCTTTGGAGTTTGATTTCTCAAGGAGGTTATCTTTACGTCTGTGGTGATGCCAAGGGCATGGCAAGAGATGTTCATCGAACTCTTCATTCCATTGTCCAGGAGCAGGAAAACGTGGACTCAACAAAAGCTGAAGCTATAGTGAAAAAACTCCAGATGGACGGACGTTACCTTAGAGATGTATGGTGA 2181 0.4411 MASNSDLVRAVESFLGVSLGDSVSDSLLVIATTSAAVVIGLLVFLWKKSSDRSKEVKPVVVPRDLMMMEEEEVDVAAGKTKVTIFFGTQTGTAEGFAKQHVFIPLSWLAVPVTVTTSLHRDDAYFLFSIMLEMALAEEIKARYEKAAVKVVDLDDYAADDDLYEEKLKKESLVFFMLATYGDGEPTDNAARFYKWFTEGKDERGIWLQKLTYGVFGLGNRQYEHFNKIGKVVDEELAEQGAKRLVAVGLGDDDQSIEDDFSAWKESLWSELDQLLRDEDDANTVSTPYTAAILEYRVVIHDPTATSTYDNNSTVANGNTVFDIHHPCRVNVSVQKELHKPESDRSCIHLEFDISGTSITYDTGDHVGVYAENCNETVEETGKLLGQNLDLFFSLHTDKDDGTSLGGSLLPPFPGPCSLRTALARYADLLNPPRKAALVALAAHASEPSEAERLKFLSSPQGKDEYSKWVVGSQRSLVEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPSEKSQDCSSAPIFIRPSNFKLPVDHSIPIIMVGPGTGLAPFRGFLQERYALKEDGVQLGPALLFFGCRNRQMDFIYEDELKSFVEQGSLSELIVAFSREGAEKEYVQHKMMDKAAHLWSLISQGGYLYVCGDAKGMARDVHRTLHSIVQEQENVDSTKAEAIVKKLQMDGRYLRDVW 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02597 726 Gene3D - 370 502 IPR023173 GO:0016491
Vimu10g02597 726 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 324 571 IPR017927 GO:0016491
Vimu10g02597 726 CDD CYPOR 322 726 - -
Vimu10g02597 726 FunFam NADPH--cytochrome P450 reductase 1 570 726 - -
Vimu10g02597 726 Pfam FAD binding domain 321 543 IPR003097 GO:0016491
Vimu10g02597 726 FunFam NADPH--cytochrome P450 reductase 370 502 - -
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 621 632 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 608 617 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 504 511 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 360 370 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 579 598 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 675 683 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 538 547 IPR001709 GO:0016491
Vimu10g02597 726 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 652 668 IPR001709 GO:0016491
Vimu10g02597 726 Pfam Oxidoreductase NAD-binding domain 580 690 IPR001433 GO:0016491
Vimu10g02597 726 Hamap NADPH--cytochrome P450 reductase [POR]. 22 726 IPR023208 GO:0003958
Vimu10g02597 726 Gene3D Translation factors 326 569 - -
Vimu10g02597 726 PIRSF P450R 22 101 IPR023208 GO:0003958
Vimu10g02597 726 PIRSF P450R 131 726 IPR023208 GO:0003958
Vimu10g02597 726 Pfam Flavodoxin 134 263 IPR008254 GO:0010181
Vimu10g02597 726 Gene3D - 570 726 IPR039261 -
Vimu10g02597 726 Gene3D - 72 279 IPR029039 -
Vimu10g02597 726 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 567 726 IPR039261 -
Vimu10g02597 726 PRINTS Flavodoxin signature 83 96 IPR001094 GO:0010181
Vimu10g02597 726 PRINTS Flavodoxin signature 233 252 IPR001094 GO:0010181
Vimu10g02597 726 PRINTS Flavodoxin signature 209 219 IPR001094 GO:0010181
Vimu10g02597 726 ProSiteProfiles Flavodoxin-like domain profile. 82 268 IPR008254 GO:0010181
Vimu10g02597 726 SUPERFAMILY Flavoproteins 135 276 IPR029039 -
Vimu10g02597 726 SUPERFAMILY Riboflavin synthase domain-like 309 568 IPR017938 -
Vimu10g02597 726 PANTHER NITRIC OXIDE SYNTHASE-RELATED 75 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02597 Vimu-Chr10 37399800 37407550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02597 K00327 - gmx:100781568 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02597 10 37399800 37407550 Vimu10g02597 10 37399800 37407550 ECH