Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02550 AACAGTATGAGTGAGGTTTCGAAAAAAGCTGCCTCTAACGGTCATGAGAAAATGGTGATTTCCAAAGAACATCAGGCAAAGATTGCTGAGGTGAGAAGGTTGATAGGGCCATTATCAGCTAAGGAATCTCTGTACTGTTCTGATGCATCCATCACAAGGTATTTAAGCTCACGAAATTGGAATGTCATCAAGGCAGCTCAAATGTTGAAGCAGAGCCTAAAATGGAGAAAAGAATACAAACCTGAAGAGATTCGCTGGGAAGAGGTTGCTGATGAAGCAAAGACAGGGTTGCTGTATAAACCAAATTATCATGACAAATATGGGAGATCAGTGCTTGTAATGAGACCTTGTCTCCAGAATTCCAAGTCAACACAAGGACAGATTAAGCATTTTGTGTACTGCATGGAGAGCGCCATTTTAAATCTTGCACCAAACCAGGAACAGGTGGTCTGGTTGGTAGATTTTCAGGGTTTCAAGTTGTCAAATATATCAGTCAAGGTTGCTCGCGAAACTGCCCATGTGGTGCAAGAGTATTATCCAAAGCGGCTGGGCTTGGCAATACTGTACAATGCACCCATGATCTTCCAACCATTTTTCTCGATGGTAAAGCCCTTTTTAGAGACTGAGACTCGTAACAAAATAAAGTTTGGCTATTCAAACGACCACAGTACAAAGAAGATTATGGAGGATTTGTTTGATCAGAGTATTCTTGAATCTGCATTTGGGGGGAAAGGAGAAACAGGAGTTGACATTAATAAATATGCTGAGAGAATGAAAGAGGATGACAGTAAGAAACTTTCTTTCTGGACACCGGTCAAGTCTCTGTCATCAGTTTCACACAATGCCCCCTTAGATTCAATCAGGTTAGATGCAGATTCTGATGCTTCCAACAATGAGAAAATTCTTGTTCCTAACTGA 918 0.4107 NSMSEVSKKAASNGHEKMVISKEHQAKIAEVRRLIGPLSAKESLYCSDASITRYLSSRNWNVIKAAQMLKQSLKWRKEYKPEEIRWEEVADEAKTGLLYKPNYHDKYGRSVLVMRPCLQNSKSTQGQIKHFVYCMESAILNLAPNQEQVVWLVDFQGFKLSNISVKVARETAHVVQEYYPKRLGLAILYNAPMIFQPFFSMVKPFLETETRNKIKFGYSNDHSTKKIMEDLFDQSILESAFGGKGETGVDINKYAERMKEDDSKKLSFWTPVKSLSSVSHNAPLDSIRLDADSDASNNEKILVPN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02550 305 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 86 249 IPR001251 -
Vimu10g02550 305 SUPERFAMILY CRAL/TRIO N-terminal domain 21 88 IPR036273 -
Vimu10g02550 305 SUPERFAMILY CRAL/TRIO domain 86 264 IPR036865 -
Vimu10g02550 305 Pfam CRAL/TRIO domain 102 243 IPR001251 -
Vimu10g02550 305 CDD SEC14 86 244 IPR001251 -
Vimu10g02550 305 PANTHER GH16843P 9 275 - -
Vimu10g02550 305 FunFam Phosphatidylinositol transfer protein 3 7 278 - -
Vimu10g02550 305 Gene3D - 1 278 IPR036865 -
Vimu10g02550 305 SMART sec14_4 92 246 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02550 Vimu-Chr10 36830441 36832714 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02550 K26544 - gmx:100777065 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02550 10 36830441 36832714 Vimu10g02550 10 36830441 36832714 ECH