Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02533 ATGGATTCTGGTAACAGTGGAAGCATCTCTTCCAGCGATGAAGAATACGATTCATCATCACATGCTGATCCATCCTTCCTCAATCATTTTGGTTCCATCTCCCACCCTCAACCATCCCTTGTTCCTTCTCACCCCTCAATGTTTGATCTCTCCTCAACCTACCTCCATGCTCTCTCACAATCCAACCCAAACCAAAACCCCCATAATTCCTTCTTAAACATCGATTCCCTTGCCCAAAGATCTCAATCCAATTGCACTCTCCCCGAAACCCTTCCATCTTCTTCATCAGCCACGGCAGCAATAAATCAATGCTTGTTGGCTCCTCAACCCCTTGCCCACGACAACACCAGTGCAAGACAGCTCTCCTCACCACCGCAAACCACCAACCTCGTACGCAACTCCAAGAAACGAAGCAGAGCTTCAAGGCGTGCACCCACCACCGTTCTCACCACCGACACCACCAATTTCAGATCCATGGTTCAAGAGTTCACTGGAATCCCTGCACCTCCCTTTTCACCTTCCTTCTCTCGCCGCCTCCCTCTTCGCTCAAACCCTTTGCTTTCAACTTCTTCAAGGACCTCCTTACACAACAACGCCACTATCAGTCTTTCTCCTAATAATAACTCCATTAACTACCAGCTACTTCCTGATCTGTCGTTACCCTATCATCCCCCACAGAATATCATGCAACATCACCCTATTCCCACATTCCACCCCTCTTATTCTCTTCAAACTCTTGTCCCTGCAGGATTTGGTGCAAAGTCTCTATTCATGCCCGCCCTTGATGCGCATGATCTGGTGGTTGCACAGGGTCATCAACACGTGGTATCTGAGGGCATGCTTCAGAGGAGTGGCGGTGACGGTGACTGTAGAGATGGAAGCATAGTTGGAGGAGGGAGAAGAGATTCGTTTAGGTGCTTGGATGGGAACAACTATGGTGGGTGCAAGCTCAACATCTCGGTTTCTGCTTCGAGCAGCGTGAACCATGAAAAGAACTTGGAGAATGGTAATTCCCCTAGGGAAGGTGCCGTGGAAGCGTGGATTTGTTCTTCTGATCAATAG 1062 0.4896 MDSGNSGSISSSDEEYDSSSHADPSFLNHFGSISHPQPSLVPSHPSMFDLSSTYLHALSQSNPNQNPHNSFLNIDSLAQRSQSNCTLPETLPSSSSATAAINQCLLAPQPLAHDNTSARQLSSPPQTTNLVRNSKKRSRASRRAPTTVLTTDTTNFRSMVQEFTGIPAPPFSPSFSRRLPLRSNPLLSTSSRTSLHNNATISLSPNNNSINYQLLPDLSLPYHPPQNIMQHHPIPTFHPSYSLQTLVPAGFGAKSLFMPALDAHDLVVAQGHQHVVSEGMLQRSGGDGDCRDGSIVGGGRRDSFRCLDGNNYGGCKLNISVSASSSVNHEKNLENGNSPREGAVEAWICSSDQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02533 353 MobiDBLite consensus disorder prediction 114 147 - -
Vimu10g02533 353 MobiDBLite consensus disorder prediction 114 134 - -
Vimu10g02533 353 MobiDBLite consensus disorder prediction 1 30 - -
Vimu10g02533 353 Pfam VQ motif 143 170 IPR008889 -
Vimu10g02533 353 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 241 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02533 Vimu-Chr10 36602481 36604250 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02533 - - gsj:114410527 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02533 10 36602481 36604250 Vimu10g02533 10 36602481 36604250 ECH
Vimu1g01833 1 22104526 22107250 Vimu10g02533 10 36602481 36604250 PCT