Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02531 ATGGCAATAGGCGGAACAGTTGCCAGTATGTACACGCCTTCTCCACCACTCTCTTCCTTCACCCCCACGCGCCTCTTCTCACGCTCTCATTTCGCTGCAAAGCTTCGATTTCCTCCTTCAATTCGACTTCGTGCTTCTTCTACTGCCGTCATCGACACCGAAACCAATCCAACAGAATCCGTGGTAGTTGAAAAGGAAGTGAGGAATAGCAGCAACCCGTTGGCTTGTCCCGTGTGTTATGATTCCTTGACATGGAATGGTGGTCCTGGTTTCTCCGTAGATACAATCAGCGGGTCTAATTTTCAATGTTGTACATGTCAGAAAACATATGTTGGTAACCAAACTCATATTGATCTCACCGTAACAGGTGGAGCTAAGAGCTACGGTGAAGTTATGCCAGATCAATCTTTAGTTGTATTTGATGATCTTAGAGAATGGGTGCCATTGATATCATTTCTCTATGAGAGGGGCTGGCGTCAAACCTTTTCTGTGTGGGGTGGTTTTCCAGGTCCTGAGAAAGAGGAAGCAAAATATAATGGAGGTGCCAACAATGATAATAATGCCTTCTGTCATGTTTGGTATTTTGTTCTTGAGAAAATCAGTGTTAACATCATCACTGGTTTTAATCTCCTTAGAAAAGGGTGCAAAGCCTCCGGACTCTTGTTCAAGGTACACAATGAAAGTTTTGCAGCATCTTCTAAAGAGGAGACTAAGATCAGTCAGAGGGCATTAGCCAATTTTGAATTGATGAAGGGTTTCCTAAAACCAGTATTGGGAGGAAATATAGTTGATGCTAGTTGTGCAAGTGGATTGTTCTCAAGATTATTCGCAAAAAGTCAACTGTTTTCTTTTGTTGTTGCTCTAGACTACTCGGAAAACATGTTACAGCAATGTTATGAATTCATTCAGCAGGAAGAGAACTTCCCAAAAGAGCTCCCCTTTGTTTCTAATTCTATTGATGCTGTGCATGCTGGCGCCGCTCTACACTGCTGGCCTTCACCATTGGCAGCTGTTGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTATTTGTTGCCACTACCTACATACTTGATGGTCCTTTTTCTATTATCCCATTTCGAAGTATATTACGGCAGAACCTAAGGCAAGCATCTGGGAACTACAGCTTTCTCTCTGAACGTGAGCTGGAAGATCTCTGCAGGGCGTGTGGGCTGGTTGGGTTTAAATGCATTAGAAATGGACTTTTTGTGATGATCTCTGCTAGAAAGCCCACTTAA 1260 0.4325 MAIGGTVASMYTPSPPLSSFTPTRLFSRSHFAAKLRFPPSIRLRASSTAVIDTETNPTESVVVEKEVRNSSNPLACPVCYDSLTWNGGPGFSVDTISGSNFQCCTCQKTYVGNQTHIDLTVTGGAKSYGEVMPDQSLVVFDDLREWVPLISFLYERGWRQTFSVWGGFPGPEKEEAKYNGGANNDNNAFCHVWYFVLEKISVNIITGFNLLRKGCKASGLLFKVHNESFAASSKEETKISQRALANFELMKGFLKPVLGGNIVDASCASGLFSRLFAKSQLFSFVVALDYSENMLQQCYEFIQQEENFPKELPFVSNSIDAVHAGAALHCWPSPLAAVAEISRVLRPGGVFVATTYILDGPFSIIPFRSILRQNLRQASGNYSFLSERELEDLCRACGLVGFKCIRNGLFVMISARKPT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02531 419 CDD AdoMet_MTases 261 358 - -
Vimu10g02531 419 Pfam Methyltransferase domain 264 352 IPR013216 GO:0008168
Vimu10g02531 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 411 IPR029063 -
Vimu10g02531 419 Gene3D Vaccinia Virus protein VP39 223 417 IPR029063 -
Vimu10g02531 419 PANTHER METHYLTRANSFERASE 100 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02531 Vimu-Chr10 36558417 36561986 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02531 - - vum:124842361 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02531 10 36558417 36561986 Vimu10g02531 10 36558417 36561986 ECH