Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02522 ATGAATTTGGAAAAGGCTGCGCCATTGTATCTTTCTGAAATAGCTCCACCGAAAAGGCGAGGAGCTTTCAACGCGGGCTTCAATTTCTTCGTAGGAATAGGAGTGCTTGCCGCAGGCTGCATAAACTATGGAACCGCAAAGCACACATGGGGGTGGCGGGTCTCTCTTGGCCTGGCCGTGGTGCCTGCAGCAGTTATGACAGTGGGTGCATTGCTTATAACTGACACCCCAAGTAGCTTGGTTGAGCGTGGCAAAATAGACCAAGCCAGAAGAGCCTTGCGCAAAGCCAGAGGATCCTCCATCGATGTTGAACCTGAATTGGAAGAACTGATTAAGTGGTCTCAGATTGCAAAATCTGTGGAGCAGGAACCCTTCAGGACCATATTTGAGAGGCAGTATCGACCCCACTTGGTCATGGCAATTGCTATCACATTTTTTCAACAACTCACAGGGATTAACGTCGTCGCATTCTATGCTCCTAACCTCTTTCAATCAGTGGGTTTGGGACACGATGCTGCTTTACTTTCTGCCATTATACTCGGAACAGCCAACCTTGGTTCTATTGTCTTGGGCACTGCCATTGTTGATCGGTTTGGTCGAAGGTTCTTGTTCGTAACCGGTGGCATATGCATGTTTCTTTGCGAGGTAAGCAAATTATTTATCATTTTATTATTTGATACGTGGTGGCAGCCATAA 696 0.4713 MNLEKAAPLYLSEIAPPKRRGAFNAGFNFFVGIGVLAAGCINYGTAKHTWGWRVSLGLAVVPAAVMTVGALLITDTPSSLVERGKIDQARRALRKARGSSIDVEPELEELIKWSQIAKSVEQEPFRTIFERQYRPHLVMAIAITFFQQLTGINVVAFYAPNLFQSVGLGHDAALLSAIILGTANLGSIVLGTAIVDRFGRRFLFVTGGICMFLCEVSKLFIILLFDTWWQP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02522 231 Gene3D MFS general substrate transporter like domains 4 230 IPR036259 -
Vimu10g02522 231 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 6 216 IPR045262 GO:0015144
Vimu10g02522 231 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 231 IPR020846 GO:0022857
Vimu10g02522 231 Pfam Sugar (and other) transporter 6 216 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu10g02522 231 SUPERFAMILY MFS general substrate transporter 7 217 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02522 Vimu-Chr10 36470802 36471497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02522 4 217 Organic Solute Cotransporters AT1G34580 59.447 3.99e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02522 K24193 - gmx:100799418 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02522 10 36470802 36471497 Vimu10g02522 10 36470802 36471497 ECH