Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02511 ATGAAGCAAAGAAGAAGAGTTAGGGTTGTGTGGTCTGATTCTGATTCAGATTCAGATTCAGCTGTGAGTGTGCCAAAAGGTAAATGCTCACTCCCTTCAGGGGAAACGGGGAAAGGGAAAGGGATAAGGATGAGGCTTTGGGGATCGGAGATCGTCTTCGCCTTGTTGCTCTGTGGGACCCTCTCTTCCACCGCTCAACCGCATCATCATCATCATCATCGTAGGTTTTCTCAGACCAACACCACCGCTACAGTCTGTCCCGTCCACTCCCTTCTCGATTTCGTCTTAGGGTTTCCAGATTCCATATGCCCTCTTCCCGATTCTCTTGGATCCATTGCCGTCACCGAGGGAGATGAGGTTTCTTTGCAGAAGGCGCTGAATATGGTTCACAAGAATAATCACGAGTATGTGGCTGTGCTCTTCTATGCGTCGTGGTGCCCTTTCTCGCGCGTGTTTAGACCGGTTTTCTCCGTGCTCTCTGCACTACACTCTTCCATTCCTCATTTTTCTATTGAAGAATCCTCGGTTAGGCCGAGCATACTGTCCAAATATGGTGTCCATGGTTTCCCTACACTGTTCATTTTGAATTCTACCATGCGGGTTCGGTATCATGGTTCTCGGACACTTGCTTCGCTCATTGGTTTCTACAATGATGTTACAGGGATTAGGATTGATTCACTTGATCAACTATCACTTGAGAAAATTGGTCGTTCTTCCACTGATAAAAGTCTAGGTAACACCGAGCCAGAAAGTTGTCCATTTTCATGGGCTAGATCTCCAGAAAATTTGCTGCGGCAGGAAACGTATTTGGCTCTGGCCACTACGTTTGTGGTTTTGAGATTACTATACTCCTTTTTTCCTACGCTGCTTATATGTATTCAATTTGCTTGGAGAAGGGTCATCCCAAATATTAGATTAGGGAGCTTACTGGAGCATCCTTTGATTTATTTGAAGCGGCTAATACAGTCTTTTAACTGTTTGAAAGAGCCGTGCAAGAGAAGTAATCTGCAGGAAGGAGCAATGAATGCTAGAGCATGGGCATCCAAGTCCCTAGCCACCGTTTCAATCGGAGAGGAAAGTAGCAGCCGCGGAATGCATCAGTGA 1104 0.462 MKQRRRVRVVWSDSDSDSDSAVSVPKGKCSLPSGETGKGKGIRMRLWGSEIVFALLLCGTLSSTAQPHHHHHHRRFSQTNTTATVCPVHSLLDFVLGFPDSICPLPDSLGSIAVTEGDEVSLQKALNMVHKNNHEYVAVLFYASWCPFSRVFRPVFSVLSALHSSIPHFSIEESSVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLASLIGFYNDVTGIRIDSLDQLSLEKIGRSSTDKSLGNTEPESCPFSWARSPENLLRQETYLALATTFVVLRLLYSFFPTLLICIQFAWRRVIPNIRLGSLLEHPLIYLKRLIQSFNCLKEPCKRSNLQEGAMNARAWASKSLATVSIGEESSSRGMHQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02511 367 SUPERFAMILY Thioredoxin-like 132 221 IPR036249 -
Vimu10g02511 367 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 44 366 IPR044606 -
Vimu10g02511 367 ProSiteProfiles Thioredoxin domain profile. 99 221 IPR013766 -
Vimu10g02511 367 MobiDBLite consensus disorder prediction 1 38 - -
Vimu10g02511 367 CDD PDI_a_ERp44_like 117 216 - -
Vimu10g02511 367 Gene3D Glutaredoxin 113 225 - -
Vimu10g02511 367 Pfam Thioredoxin 131 215 IPR013766 -
Vimu10g02511 367 Coils Coil 365 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02511 Vimu-Chr10 36358680 36362215 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02511 - - gmx:100815032 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02511 10 36358680 36362215 Vimu10g02511 10 36358680 36362215 ECH