LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g02510	ATGTCGACGCCGGAAGCGGAAGCAGCGGAACCCTCCTCCAATCACATTCACTCTCTTCCGTTAGTTGACCTCCGCCTCTTGTCTCAGCCCGAACTCTACACCCTCTCCCTCTCTGGTGCCACTCACCGCCACAGTCGAGCCAGCGACGACGATTCCGTCATTCCTAAAATCGACCGTTCCAATTTCAACGAATCCGCGGGCAGCCGCAAACAAACTTTCTCCAAACTACGCCTCAACAAGCGCAAACAAAATTGCGGGGTTCCCGCCTCCTCCTCCTCTTACCACATTCCGGAGCCTGTCGACCGAGAAAACTCCCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTCGAGCCTCTCCGCAACGAGCTGTGCCCCGACCTGGCGGACCGCCAACTGTTTCCGGTCCATGTCGAGTTCAAACAACCGCCTCCGGTGCCCGTGGCGTTTCAGAACGTTCCGATTGACGTTATTGATGCTTCTATTAGGAAGAGGAAGCGCGGCCGGCCGAGGAAGAACGATAATTCGGTATCGGTTTTCGAGGAGGAGACCAAGCAGGTTAACGAAGAGGGCAGCGCAGTGGTCACGGTCAACGAGAGGGGATTTGGTATGGACGCGGATGATTTGGATTATGATCCGTTTGGGGAGGAGTTGAAGAGAAGGACTGGAGGGTTGGAGACGGAGCCGCAGTTGTTGGAATTTTTGGAGACTCTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGCGGATTGTCCCGGCCAGTGATCTTAGCGACTTGTTGCCTGCCGGATGGAAGATAGTTATTACCCTTTTGAGGAGGGCAGGTCGTGCTTCTGTTGTTTGTCGCCGTTACCTGAACGAAAAAGAAAACAAAGAAAAGGTGCAATTCTTGTTGGAAGAAGTTACAGGCCTCGCTGGAAGTGTTGCCAAAAACATTGTTGAAACTGTCGCAGGAAGCTGCTCTAAAATGTCACTTGAAGCTGAGCTGAACATGGGAGGGAGTGTCGTGTCACACATTGCAAAACGGCAGTATCCTTGGATTTTGGATGTGAAGCTGGTTCGACTTAGCAACATCAACGTGCGATGTGACCTTCCCCGTGGAGGGTGCCACTCCGCTCTGTACCAGTGTGATAGTACTAACGCATGCTATGGATTACTATGGGAAAGTTTCCTGGGACCTTTGTGTGTGCCTTTTGGCTTTGATGCTAATACCCATGGGACATTATGGCGGGTTCCTATGTTTGTGGTTGCTAATATCGTTGTTTTTGTTATTTCCATGTACATCAACAATTGCGTGGCCAAGTTCCGGGGAAGGTTCTCCTTCGAACCTATGCAGGAGAATCCGCTGCTTGGTTCTTCTTCTTCAACATTGACCAAGGTAGGAGCCCTTCAGTGTGATAAGGTTGTTATCGGGCAACAAGGATGGAGAATTGTCATTTGTAATGGGTTACACGCTGGGATCATTCATTTCTTTGCTAGCATTCCTGGTGGGCACCAGTTTGAGTCTTACAAAGAAGCTTCTGCGTACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCCATTTAAAATCTAGTTGTACTGATGATGGCGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAGTAGTGTTGGTCATGTCCCTGCCGGAGCCACGAAGACTGATGCCAATGCAAATTATTCGTCTATTCACTCTGGTCAAGAGAATCAGCTCCCAATATCATTATCAGTTGGGAGTGGAAATTTCAACAGTGATCTAGCTTTGGGTTGTAAATCAGGAGATGCTAGTGATGACTTTAGAGGCTTTGACCATCAAACGGAAGATAAAAAACTGTTGGAGGCTGACAAGAATGATGGAAGTTCAGTTCAGGGATGTTCTCACGTGAATGATATAGTTTGTAATGTAGGCAATGAGAAGTTGGTTGGTGCTATTGAGTCTAGTGATGCTGCTTGCAATCTTTATATTCCTTTAGTTTTCTCAACTCCCTTCTCCACTAATAACAGTGACAATGGTCAAATTTCAGAGGATATAAATGCTGCGACATGCATAGAAGGGGGCATTAGTAATTTTGCTAGTCAGGATAAAAATACCGGGTGCCCTGAAAGTGTTCCCTGTGGAGTTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTAGAAGAGAACACTCAGAAAATAAGTTTTGATAGCAGCAAACTGGCTCCAAATTCTGAGGGGGAAATATTTGCTGGTAAAAATTTAGAGGATAGACATCTTATCAGTTCACAGGAAGATATGGAAATTGCAGATGATAAGGTCATTAATGATGACAAACAATTAATTGTGTGTGGCACAGACCGGGCTGAGTTTAAAGATGTTTTTACTGATGTTAAACTGCAGAGTAGTTCTGAGGGTTTTTCAGTTGTCACATCTCATTGTGAACTTAAACATGCATCTCTAAGTAATATGGACAGGACCCAGACTTCCGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCATAGTGGTTACGTTAGTAATGTTTCTTTTAGTTCTTGCACACAAGATGCAGTTGAGTATGGTGGATTTGATTTTTCTTCTGATCTTAAATTAACTAAGGATGTTAGTGATAATCATATTCTTTCTAATGAGGATGCTGTGACAAGATGTTTACAGGAGAGGAGTTCCTTGAATGACCAAAATAGCATGATGGGCAATCTTTTGCATCGTAGTTCTCAAAGTAATTTATTTGCTCTAACAGCTAATCAGCACCCTTCTGCTTTTCACGATAATGTGAATATCTGTGATGGAACCTTTGATGCACTCAAAGGTGTTGATGCTGGATACATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGGTGTAGATGCATATACTACTGCAAGCATTATGCAGGGAAACTCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGAAAAGTGATGATGGTGTTAATAAAGCAAATAAGCCTTGCTTATCAGAAAAGGCTCAGAATGAAGTTGAAATATTCCAAACTGAGTCTATGGGTCTACCCAAATTTCTTTAG	3126	0.4463	MSTPEAEAAEPSSNHIHSLPLVDLRLLSQPELYTLSLSGATHRHSRASDDDSVIPKIDRSNFNESAGSRKQTFSKLRLNKRKQNCGVPASSSSYHIPEPVDRENSQIISLLQQLFGVEPLRNELCPDLADRQLFPVHVEFKQPPPVPVAFQNVPIDVIDASIRKRKRGRPRKNDNSVSVFEEETKQVNEEGSAVVTVNERGFGMDADDLDYDPFGEELKRRTGGLETEPQLLEFLETLNGEWASQRKKRRIVPASDLSDLLPAGWKIVITLLRRAGRASVVCRRYLNEKENKEKVQFLLEEVTGLAGSVAKNIVETVAGSCSKMSLEAELNMGGSVVSHIAKRQYPWILDVKLVRLSNINVRCDLPRGGCHSALYQCDSTNACYGLLWESFLGPLCVPFGFDANTHGTLWRVPMFVVANIVVFVISMYINNCVAKFRGRFSFEPMQENPLLGSSSSTLTKVGALQCDKVVIGQQGWRIVICNGLHAGIIHFFASIPGGHQFESYKEASAYLLSVSGVQDKGHLKSSCTDDGAQQLSSSMNMASESSVGHVPAGATKTDANANYSSIHSGQENQLPISLSVGSGNFNSDLALGCKSGDASDDFRGFDHQTEDKKLLEADKNDGSSVQGCSHVNDIVCNVGNEKLVGAIESSDAACNLYIPLVFSTPFSTNNSDNGQISEDINAATCIEGGISNFASQDKNTGCPESVPCGVDNNGLGLSVKLVEENTQKISFDSSKLAPNSEGEIFAGKNLEDRHLISSQEDMEIADDKVINDDKQLIVCGTDRAEFKDVFTDVKLQSSSEGFSVVTSHCELKHASLSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTCVHSGYVSNVSFSSCTQDAVEYGGFDFSSDLKLTKDVSDNHILSNEDAVTRCLQERSSLNDQNSMMGNLLHRSSQSNLFALTANQHPSAFHDNVNICDGTFDALKGVDAGYMEPQLGIVSCSNIGVDAYTTASIMQGNSQGCVSVPLGGSILNFEKKSDDGVNKANKPCLSEKAQNEVEIFQTESMGLPKFL	1041

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g02510	1041	MobiDBLite	consensus disorder prediction	39	70	-	-
	Vimu10g02510	1041	MobiDBLite	consensus disorder prediction	165	185	-	-
	Vimu10g02510	1041	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	496	568	IPR037472	-
	Vimu10g02510	1041	MobiDBLite	consensus disorder prediction	43	57	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g02510	Vimu-Chr10	36341647	36357185	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g02510	-		-	gmx:100780637	813.142

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu10g02510	10	36341647	36357185	Vimu10g02510	10	36341647	36357185	ECH