Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02491 ATGTATCGAGGGATGAGTCTTCAGGCTCCCATCACTTGGTGTTTGTGTTTCAAACCAAAACCAAAAACAAACAATACAAATATGCTGCCACCCCTACACTCTCGCACTCGCAGCCGCCAAGGATATACTACAACCGTCACAAACGCGATGGCGCTTGTTTTTGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCTCGGTTGACACTCCCTCATCATGTGTGCCAAACTCCTTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGTCAGCTTGAGGATATAGGTTGCCAGATAATACTTGGAAATACTTATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGCGGCCTTCATAATTTTATGAATTGGCAAAGGGGTCTACTTACAGATTCTGGTGGCTTTCAAATGGTTTCACTGTTGCATCTTGCTGACATCACAGAAAAAGGTGTGACATTTCAGTCACCGGTTGATGGAAAGCCAATGCTTCTAACACCAGAGGAATCAATTCAAATCCAAAACAGAATTGGAGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACTGGTCCACGAGTTGAGGAAGCTATGTATAGAACACTCAGATGGATAGACAGATGTATTGCAGCTCACAAGAGACCTCATGATCAAAACTTATTTGGTATTGTTCAAGGCGGTTTAGATCCTATATTGAGGGATATCTGTGCTAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAAATCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCTCTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGCGTGTATCCCACCCGTACAGCACGCTTTGGCACTGCTCTCATTCCTGAGGGAGTATTGAAATTAAAACACAAAGCAATGGCTGAAGACACCCGTCCAATTGATCCCACTTGCCCTTGTATGGTTTGCAAGAACTATACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGATCTCAGCTTTTGTCGTATCATAATTTATACTACATGCTGCAGTTTCCGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCCTCCTGCTGTGCTCCATTTTCATCATGCGAAGAATCTGTTTCTAAAAGCATGCCCGAAGAAGTTATTTTAGCGGGGTATACTTCTGGAAGTTCATGTTCCCTAATACTTCCTTTCATTGAATTTGCACGCTTTTTATTTGGTTCTCTCTGCATTTTTTCTGGCTTTTGTTCAATATTGTTTGGTGTTAAGCTTTTGGGGTTGTTTAATTCGTATAAAAAATGGAACTTTGGGAAAAAGATGCCTCTAGGGCTCATTATAGGAATAGGAAGGGCATATCGAAGAAAGCGACCTTCTTCACTTGACATTCTATCATCAAAACGTGCTCCTCGTGGTTATTACAAGGGCAAGAATTGCAAGCCTACTGGTTTCCACACCCGCAAAGACAATGAACATGTTGAACACCTCTGGGAAAGAGCTTGA 1653 0.4301 MYRGMSLQAPITWCLCFKPKPKTNNTNMLPPLHSRTRSRQGYTTTVTNAMALVFEVLGRFNRARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICAKGLVERNLPGYAIGGLSGGEDKKSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMAEDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCEESVSKSMPEEVILAGYTSGSSCSLILPFIEFARFLFGSLCIFSGFCSILFGVKLLGLFNSYKKWNFGKKMPLGLIIGIGRAYRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKDNEHVEHLWERA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02491 550 Gene3D - 49 393 IPR036511 GO:0006400|GO:0016763
Vimu10g02491 550 Hamap Queuine tRNA-ribosyltransferase [tgt]. 52 413 IPR004803 GO:0008479|GO:0101030
Vimu10g02491 550 SUPERFAMILY tRNA-guanine transglycosylase 50 391 IPR036511 GO:0006400|GO:0016763
Vimu10g02491 550 NCBIfam tRNA guanosine(34) transglycosylase Tgt 54 390 IPR004803 GO:0008479|GO:0101030
Vimu10g02491 550 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 46 390 - -
Vimu10g02491 550 Pfam Queuine tRNA-ribosyltransferase 62 390 IPR002616 GO:0006400|GO:0016763
Vimu10g02491 550 NCBIfam tRNA-guanine transglycosylase 54 390 IPR002616 GO:0006400|GO:0016763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02491 K00777 - gmx:100819664 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02491 10 36089098 36100142 Vimu10g02491 10 36089098 36100142 ECH