Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02445 ATGGCAGAGACCATTCGTTTGGTTGTTGCTGTTTTTGGCAATGCAGCCTCAATGTCCCTTTATGCTGCACCAGTGGTTACCTTTAAAAGAGTTATAAGAAAGAAAAGCACAGAAGAGTTTTCATGCATTCCTTACATTATTGGGCTCTTGAACTGTCTCCTTTATACTTGGTATGGTTTGCCTATTGTGAGCTGCAAGTGGGAAAATTTTCCTATAGTCACTGTTAATGGTGTTGGGATTCTTCTCGAGTTATCCTATGTTCTCATTTATTTTTGGTTTGCTTCACGCAAAGGAAAGGTGAAGGTAGCCATGACTGCAATACCAGTTGTGCTTGTGTTCTGCATAATTGCTGCAGTCTCAGCTTTTGCATTTCATGATAGCCGTCACCGAAAGCTTCTTGTGGGTAGCTTTGGCTTAGTTGTTTCAGTAATACTGTATGGATCTCCCCTCGTTGTAATGAAAAAAGTTATACAAACAAAGAGTGTTGAATTTATGCCACTAACATTATCCGTGTGCTCATTCTTTTCTGCTACACTCTGGCTGATCTATGGAATCCTCATTAGAGATATTTTCGTTGCGGGACCAAGTATCCTTGGAACTCCCTTAGCCATCCTGCAGCTTGTACTTCACTGCAGATATCGAAAAAAGAGTGTTGTGGAAGAACCAAGCAAGGGAGACCAGGAAAAGGGTAACTTAGAAAAGGTGGACATGGAAATGGGGAAAGTTGAAACGAATGTCACGAATCACATGACCGAAAACTCGTGA 765 0.4131 MAETIRLVVAVFGNAASMSLYAAPVVTFKRVIRKKSTEEFSCIPYIIGLLNCLLYTWYGLPIVSCKWENFPIVTVNGVGILLELSYVLIYFWFASRKGKVKVAMTAIPVVLVFCIIAAVSAFAFHDSRHRKLLVGSFGLVVSVILYGSPLVVMKKVIQTKSVEFMPLTLSVCSFFSATLWLIYGILIRDIFVAGPSILGTPLAILQLVLHCRYRKKSVVEEPSKGDQEKGNLEKVDMEMGKVETNVTNHMTENS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02445 254 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Vimu10g02445 254 PANTHER RAG1-ACTIVATING PROTEIN 1 16 224 IPR047664 -
Vimu10g02445 254 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
Vimu10g02445 254 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Vimu10g02445 254 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Vimu10g02445 254 Gene3D - 133 224 - -
Vimu10g02445 254 Gene3D - 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02445 Vimu-Chr10 35439171 35440617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02445 1 248 Miscellaneous Gene Families AT5G53190 52.124 1.06e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02445 K15382 - gmx:100813119 422.55