Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02431 ATGGCTTCGGAGAAAATCGAGCGAACTGCAATCGAAATGAACAATGAGGATACAAATTTGAGGGAACGTTCTTCTCTTCCTCCATCGCAAAAATCATTCAAAACTCAAAATTTGGGAATCACAGAACGAGCATTCTCTGCTGCAGGCGCCGCCTTCTTTTCAGTCATCATTGCCAATCCTCTCGATGTTGCCAAGACAAGATTGCAAGCACAAGCAGCAGGGGTTCCATATTCTCATCCACTCAGTAATATGACTAGTAGAATGGCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGGTGTTCTCCATCATGCCACCGGGCTGGAATCCAAGGAACAGTGTCCATCTGTCCTCCTGAGTGCTTTCGCTACAAAGGAACATTGGATGTCATCTATAAAATTATACATCAGGAGGGAGTTGCTAAGCTGTGGAGAGGCACAAATGCTGGGCTGGCTCTTGCAGTACCAACTGTAGGAATTTACCTTCCTTGCTATGATATATTACGCAATTGGTTGGAGGATTTCACAGCAAAAAACGCTCCAACTACAGTTCCTTATGTACCATTAGCGGCTGGTTCATTGGCGCGCTCTCTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGTGACTGAAATTGATAAAAAGCCTCCTGGAGTGTTTCAGACCCTTCTTGGTGTTATGTCGCATGTCAAAAGCACAAATAATCCACAAAGTAATTTGCGAGGTTATCGTCTTTTGTGGACTGGCATGGGAGCTCAACTTGCTCGTGATGTACCCTTCTCTGCCATTTGTTGGTCCACACTCGAACCAACTAGAAGGAAACTTCTTAGTTTTGTTAAACACGATGAGGCTAATGTGTTTAGTGTTCTTGGAGCAAATTTCGGAGCTGGCTTTGTTGCTGGAACTTTAGCAGCTGGAGTTACATGTCCTTTAGATGTTGCAAAGACTCGAAGACAGATAGAGAAGGATCCTATGAAGGCATTGAAAATGACTACGAGACAAACATTAATGGATGTGTGGAGAGGTGGAGGCTTGAAAGGATTGTTTGCAGGTTTTGGTCCACGAGTTTGTCGATTAGGGCCTTCTGTTGGATTAGTGATTTCGTTTTATGAAGTTGTCAAGTTTGGTCTTCATCACTACAACACATCATCATGA 1185 0.4321 MASEKIERTAIEMNNEDTNLRERSSLPPSQKSFKTQNLGITERAFSAAGAAFFSVIIANPLDVAKTRLQAQAAGVPYSHPLSNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVIYKIIHQEGVAKLWRGTNAGLALAVPTVGIYLPCYDILRNWLEDFTAKNAPTTVPYVPLAAGSLARSLACATCYPIELARTRMQAFKVTEIDKKPPGVFQTLLGVMSHVKSTNNPQSNLRGYRLLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSFVKHDEANVFSVLGANFGAGFVAGTLAAGVTCPLDVAKTRRQIEKDPMKALKMTTRQTLMDVWRGGGLKGLFAGFGPRVCRLGPSVGLVISFYEVVKFGLHHYNTSS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02431 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 284 IPR018108 -
Vimu10g02431 394 PANTHER FI19922P1-RELATED 30 391 IPR045315 GO:1990542
Vimu10g02431 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 172 IPR018108 -
Vimu10g02431 394 MobiDBLite consensus disorder prediction 1 33 - -
Vimu10g02431 394 SUPERFAMILY Mitochondrial carrier 38 382 IPR023395 -
Vimu10g02431 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 386 IPR018108 -
Vimu10g02431 394 Gene3D Mitochondrial carrier domain 111 388 IPR023395 -
Vimu10g02431 394 MobiDBLite consensus disorder prediction 1 19 - -
Vimu10g02431 394 Pfam Mitochondrial carrier protein 188 285 IPR018108 -
Vimu10g02431 394 Pfam Mitochondrial carrier protein 302 388 IPR018108 -
Vimu10g02431 394 Pfam Mitochondrial carrier protein 38 174 IPR018108 -
Vimu10g02431 394 Gene3D Mitochondrial carrier domain 18 110 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02431 Vimu-Chr10 35264701 35268334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02431 134 385 Organic Solute Cotransporters AT3G55640 25.581 4.33e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02431 K15119 - gmx:100778501 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02431 10 35264701 35268334 Vimu10g02431 10 35264701 35268334 ECH