Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02421 ATGCAGAGTAGGGGATCGAGTCACAGACTCTCAACTATGGGTAATCGATCCCGCATTCCCGCACTCCTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTCGCTGGAAGGCTTTGGCAGGATGCAGAGAATCGCGTTTACCTCATCAAAGAGCTCGACAGGATCACTGGTCAGAACTGGTTGATGGCGTGCGTATTATTAGTTATTATTAAGGAATTAGGATTCAGTATGTGTCGTAGATCAACTGGACAATCTGCTATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGCGAGTTAAATTTACTCGAACGGAACAACATAAGAAGCTTGATGCCCTTGAGACGGAACTTTCTGCGGCTAGACAAGAGGGTTTTGTTTCGAAACCCTTGATAGAGACTAATGGAACTTACTCTAGGAGAAGGCCGTTGGTTGTGATAGGTATACTAACAAAGTTTGGCCGCCAAAAGAATAGAGATGCAATCCGCAAGGCGTGGATGGGAAGTGGTTCATCTTTAAAGAAAATTGAAGATGGAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGGTTCAAATTCCTTCTTTTAGACTTGTATGGGTTAGGGTGTGTGGGAGAAATCGGAACATGGCTTATATCTTACATATACTTTTGCAGTAAAAATCGTGGAGACAATCTGGATAAAGACATTGAGCGTGAGAATAGGCTGACTAATGACTTCATAATTCTTGATAATCACGTGGAAACAAATGATGCATTCCCAAAGAAGGCTAAATTGTTCTTTGCTTATGCTGCAGACAAATGGGATGCTGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCTGCTCACTTGGACAAACCACGTGTTTACTTGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAGCTAGCTTGTCTGATCCGCTTCCGCTGTCCTCGCTGTTTACCGGCGGCCGATCGCCGTGGCCGCCGGCAGGCCTCCTAA 1026 0.4405 MQSRGSSHRLSTMGNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQNWLMACVLLVIIKELGFSMCRRSTGQSAISVDDTLKIIACRRVKFTRTEQHKKLDALETELSAARQEGFVSKPLIETNGTYSRRRPLVVIGILTKFGRQKNRDAIRKAWMGSGSSLKKIEDGKGIIVRFVIGRRFKFLLLDLYGLGCVGEIGTWLISYIYFCSKNRGDNLDKDIERENRLTNDFIILDNHVETNDAFPKKAKLFFAYAADKWDAEFYAKVNDDVYVNIDALGATLAAHLDKPRVYLGCMKSGEVFSELACLIRFRCPRCLPAADRRGRRQAS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02421 341 Coils Coil 106 126 - -
Vimu10g02421 341 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 116 311 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu10g02421 341 Pfam Galactosyltransferase 223 316 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu10g02421 341 Gene3D - 141 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02421 Vimu-Chr10 35162620 35168899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02421 22 316 Glycosyltransferase AT5G53340 55.593 1.48e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02421 K20854 - gmx:100779561 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02421 10 35162620 35168899 Vimu10g02421 10 35162620 35168899 ECH