Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02404 ATGGGTTTGGTTGATATTCTATGTTCTTCCAGATTTCTTTTTACACTAGTTGAGGCCACTAGCAGGTCAGGGGCCATGTGGCCCCTAAAATTAGAAATGGAGTCTACTGTTACCATTGGCTGGACCGTCTTCAGTTCAAGTATATTTATGTTTGTAGCTCTTGTTCTCTCCACATATCTGATATTTCAGCATTTAGCTGCCTATAATCAGCCTGAGGAGCAGAAGTTTTTGATTGGTCTCATCTTAATGGTTCCTGTTTATGCCTTAGAATCGTTTTTGTCACTATTGGATTCCAGTGCAGCATTTAACTGTGAAGTTATTCGGGACTGCTATGAGGCTTTTGCATTGTATTGCTTTGAGAGATATTTGATAGCTTGCTTAGGTGTGGCTGTTGCATTTCTTTTTTACATGGGAGCATTTAAAGGGTCTTTGGCTCAAGAGCTGACAACTCGTATACAAGACTATATCATCTGTATAGAGATGGGTGTTGCTGCTGTTGTGCACCTTTACGTCTTTTCTGCAGTACCTTACAAAAGAGGAGAGAGGTGTGTCCGTGATGTATCAGTGATGGCAGACTATGCATCACTGGGAACCCCTCCTGATCCTGCTGAGGTTCAAGATTCTGAACGCTCAACTAGAATGCATCTGGGTAGACATGATGACATAGAGAGGCGTATGAAATTTACCCACAATGTTCGTGATGTGGTCTTCGGAAGTGGTGAAATTATTGTCGATGACATGAAATTTACAGTTTCACGTGTAGCAGAACCTGTAGAAAGGGGTATTGCAAAGTTAAGCAAAGCCTTCCATCAGATATCCGAAAATGTGAAACGCCATGAAGAGGAGCGGAGAAGAAACACAAAGGTCAAGGATGACAGCTACGTTGTTCCCTTGCTTTCTTGGAGACCAGAATTTTCTGATGTTGACGACACTTTTGTGGAAGGAAGTGTCAGTGATAGTGGTTTTCCCAGCAGAAAGAGGCAATATCTCCCATCGAAAGCGTCCGTATCGTAG 1014 0.425 MGLVDILCSSRFLFTLVEATSRSGAMWPLKLEMESTVTIGWTVFSSSIFMFVALVLSTYLIFQHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSSAAFNCEVIRDCYEAFALYCFERYLIACLGVAVAFLFYMGAFKGSLAQELTTRIQDYIICIEMGVAAVVHLYVFSAVPYKRGERCVRDVSVMADYASLGTPPDPAEVQDSERSTRMHLGRHDDIERRMKFTHNVRDVVFGSGEIIVDDMKFTVSRVAEPVERGIAKLSKAFHQISENVKRHEEERRRNTKVKDDSYVVPLLSWRPEFSDVDDTFVEGSVSDSGFPSRKRQYLPSKASVS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02404 337 Coils Coil 262 282 - -
Vimu10g02404 337 SMART Solute_trans_a_2 42 177 IPR005178 -
Vimu10g02404 337 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 128 286 IPR005178 -
Vimu10g02404 337 MobiDBLite consensus disorder prediction 317 337 - -
Vimu10g02404 337 Pfam Organic solute transporter Ostalpha 129 177 IPR005178 -
Vimu10g02404 337 Pfam Organic solute transporter Ostalpha 44 128 IPR005178 -
Vimu10g02404 337 MobiDBLite consensus disorder prediction 316 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02404 Vimu-Chr10 34971042 34975050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02404 - - gmx:100804401 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02404 10 34971042 34975050 Vimu10g02404 10 34971042 34975050 ECH