Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02398 ATGGATTTGATAAAGGCTTTGAGGTTGAGCCCTTGCGTAGGTGCAATTCCTTCACCACCATTTATCACTCTTGCTAGTGTTAGCTTCTGTGCCCCTCCTCTCTGTACAGCAAAACAATGTAGTCATTTTTGCATCTATACAAGCACTCGCAGAAAGCTTTTCACTCCAATTCCACGTGGCAGAAAGAGAGACTCTGATTCAGAGCCGCTTCTAGAACCCTCTATTGTCCAAGAACTATCATTACTAGAAGAAGAGGAAGAAGAAGAAGAAGAATTCCTCGACGAGTATGAATACGAGACAGCGTTGGATGATAATGATGATGAAGATGACGGTGACGATGACGAATACTATGACGAACAAGAAGAGGCTGGTGTACCTTATAATGTTTTGAAGGCAGGTGATGGCGGCGCAGGCGGTGGAATCTCCCTCGCTGGCACATGGTGGGACAAAAAAGCGTTAGCCATTGCTAAAGAGGTTACTCTCTCTTTTGATGGCGAATTGCAAATTTATGCTTTTAAAACACTGCTGAACTCCACCATTCAAGTGCGCATTGAGAACCTTTCCAAAAAGTCTGGCTCGCCCAGCATGGAAAATATTGAAGCGTTCTCTGCAGCGTATAGAGAAAAATTGGATGAAGCAGAACTTGCTAAATCAGTTCCTGACAATTTATGTTTGGAGGTGTCTTCTCCTGGTGTGGAAAGAATAGTTCGGATTCCAGATGACCTAGATCGCTTCAAGGACCGACCTATGTATGTGAAATATGTCATTAATAATGATCCAAATAACCCAGCTGCAGAGAGTGAGGGTGTCTTCATGCTTGAATCCTTTGACCTGGAAACGAAATGTTGCACCTGGGGTTTAGCAGATGTGAAAGTCAACAGACAGAAATCAGGTAAAGGAAGACCGCTGAATAAAAAACAAAGAGAATGGCGTTTAAGCATTCCCTTTGATTCCTTACGTTTTGTACGGTTGCACTCTGATATTTAA 987 0.4296 MDLIKALRLSPCVGAIPSPPFITLASVSFCAPPLCTAKQCSHFCIYTSTRRKLFTPIPRGRKRDSDSEPLLEPSIVQELSLLEEEEEEEEEFLDEYEYETALDDNDDEDDGDDDEYYDEQEEAGVPYNVLKAGDGGAGGGISLAGTWWDKKALAIAKEVTLSFDGELQIYAFKTLLNSTIQVRIENLSKKSGSPSMENIEAFSAAYREKLDEAELAKSVPDNLCLEVSSPGVERIVRIPDDLDRFKDRPMYVKYVINNDPNNPAAESEGVFMLESFDLETKCCTWGLADVKVNRQKSGKGRPLNKKQREWRLSIPFDSLRFVRLHSDI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02398 328 PANTHER OSJNBA0006B20.18 PROTEIN 58 328 - -
Vimu10g02398 328 Pfam RimP N-terminal domain 177 233 IPR028989 -
Vimu10g02398 328 SUPERFAMILY YhbC-like, N-terminal domain 177 233 IPR035956 -
Vimu10g02398 328 Coils Coil 75 99 - -
Vimu10g02398 328 Hamap Ribosome maturation factor RimP [rimP]. 150 328 IPR003728 GO:0042274
Vimu10g02398 328 MobiDBLite consensus disorder prediction 99 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02398 Vimu-Chr10 34916548 34922621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02398 - - gmx:100783320 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02398 10 34916548 34922621 Vimu10g02398 10 34916548 34922621 ECH