Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02395 ATGGAGGACATTCAGGGTCATGGTAATGGTGAACAAGTTTGTAGAGAAATGGAGGATGGTGAGGGTGAGCTTCAGCCTGAAGGTCATGGTGATGTTGAACAAGTTGGCAGAGAAATGGAGGACGGTGAGGGTGTCGTTCAGCCTGAAGTTGTTAAAGAGATTGAAAATGGAGATTATGGTGAAGTACATAATGTAGAGGAGGAAGAAGTACATGATGCATATGAGGCTAAAGTACATGATGTACATGATTTTGAGCTACAGGATGTACATAAAGATGAGGATGAGGATGAGGATGAGGGTGGACATGATGGTGATGATGTGGGTGGACATGATGCTGAAAATGATGTTGATGATAAGGATGAGGATGTAGATGATGGTGAATATGAAGATGAAAATGTAGATGACTGTATGAGTGAAGAAAGTGAAAGTCTAGTTGATTTTAGGACTTTATTTTCAAGAGCTTTTGGTTATGGTCACAAAGTTGTGAAGGGTGATTGCAGTGCCTGGATCTTTGTTTCGTCCAATGGGTTGGTCACAGTTGGTTCTTTCCTATTCTTCCTCTTGGTCATTTCCTGGGTTTATTTATTTGCATTTCCCACTCCTCCCACAGTGATTAAGAGTTATGAGACTTCCAACGGTTCTGTCTCACCTGTTCAGAGTCATGATATTCCCAACAGTTCTCAGTTATCTGTCCAGGGTCATGATATTCCCAACAGCTCTCACCCTTTTGCTCAGAGTTATGATGAGATTTTGAAATCCAATTTTTCAATGGACACATGCAATGTGTTTGAAGGAAGTTGGGTAAGGGATGATAGCTACCCTTTGTATGATGCTTCTCACTGCCCCTTTGCAGAAAGGGGATTTAACTGCCTTGCTAATGGGAGAAAAGATAGAGGTTACACAAAATGGAGGTGGAAGCCGAAGAACTGCGAGATTCCAAAGTTTGATGCCCGTCGAATACTAGAACAACTTCGTGGGAAAAGGGTGGTTTTTGTTGGTGATTCGTTGAGTAGGACGCAATGGGAGTCCTTGATATGTTTGCTAATGACAGGAGTTGAGAATAAGAAGAGCGTCTACGAAATCAAAGGCAACAAGATCACAAAACAGATAAGGTTTTTAGGTGTAAGGTTTAGTACTTTTGATGTTAGAGTTGATTTTTATCGATCGGTATTCCTGGTGAAGCCTGGTTCTGTGCCTAGACATGCTCCTCAGAGGGTGAAGACTACGCTCAGATTGGATAAGATTGATGATATTAGCAACGAGTGGATTGATTCTGACTTTCTTATATTCAATTCAGGTCACTGGTGGACACGGACTAAACTTTTTGACATATATTCAACGCGCAATAGCTTTTCTTTAAATGGTAACGTCATCCCTATGGTTGGTAACTCGTTGAAGCTTGGAATGTCAATTAATTCTGCTTTCAAAACAGCTTTGCTCTCCTGGGCATCTTGGGTGGAGAATGCAATTGATACAAACAGGACAAGAGTTTTCTTCCGCACCTTTGAATCATCTCATTGGAGTGGACAGAACCATAATTCTTGCAAAGTGACTCAAAAGCCTTGGAAGAGAACTAATGGCAAGGAGAGAAGTCCAATTTCAGATATGATCAGCAAAGTTGTGAAAAATATGAGTACTCCCGTGACAGTTTTGCATGTTACACCAATGACTGCATATAGAAGTGATGGACACGTGGGGACTTGGAGTGACAAGCCATCTGTACCCGATTGTAGCCATTGGTGCTTACCTGGTGTTCCTGATATGTGGAACGAAATTCTCCTCTCATATTTGCTACCAAAAGAAGAAGCAAATTAA 1815 0.4138 MEDIQGHGNGEQVCREMEDGEGELQPEGHGDVEQVGREMEDGEGVVQPEVVKEIENGDYGEVHNVEEEEVHDAYEAKVHDVHDFELQDVHKDEDEDEDEGGHDGDDVGGHDAENDVDDKDEDVDDGEYEDENVDDCMSEESESLVDFRTLFSRAFGYGHKVVKGDCSAWIFVSSNGLVTVGSFLFFLLVISWVYLFAFPTPPTVIKSYETSNGSVSPVQSHDIPNSSQLSVQGHDIPNSSHPFAQSYDEILKSNFSMDTCNVFEGSWVRDDSYPLYDASHCPFAERGFNCLANGRKDRGYTKWRWKPKNCEIPKFDARRILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVENKKSVYEIKGNKITKQIRFLGVRFSTFDVRVDFYRSVFLVKPGSVPRHAPQRVKTTLRLDKIDDISNEWIDSDFLIFNSGHWWTRTKLFDIYSTRNSFSLNGNVIPMVGNSLKLGMSINSAFKTALLSWASWVENAIDTNRTRVFFRTFESSHWSGQNHNSCKVTQKPWKRTNGKERSPISDMISKVVKNMSTPVTVLHVTPMTAYRSDGHVGTWSDKPSVPDCSHWCLPGVPDMWNEILLSYLLPKEEAN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02395 604 MobiDBLite consensus disorder prediction 91 139 - -
Vimu10g02395 604 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 197 594 IPR029962 GO:0016413
Vimu10g02395 604 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 312 595 IPR026057 GO:0016740
Vimu10g02395 604 MobiDBLite consensus disorder prediction 1 64 - -
Vimu10g02395 604 MobiDBLite consensus disorder prediction 115 139 - -
Vimu10g02395 604 MobiDBLite consensus disorder prediction 12 64 - -
Vimu10g02395 604 Pfam PMR5 N terminal Domain 259 311 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02395 Vimu-Chr10 34897487 34905764 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02395 - - var:108329943 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02395 10 34897487 34905764 Vimu10g02395 10 34897487 34905764 ECH