Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02382 ATGGCAACAGCCTTGTCCACGACCAGCGTGCTATGCTGGAGGAATCCGCAGAACCTGCTCGTCATGCCCTCTTCACATACACCTTGTTATTCCTCACAGCAAATTGGGATTCTAAGAACTGTGGCTGCTTTAGCCGCAGAAGGCAGAGAAAGTGAGAAGTTCTCCTCTTTGTTGGTGACCAGAAGAACAGTTTTGGCTTCTGGGGTTTCCTTGCTGGGTTTCCCGGGTGAGAGTTTGGCCGTGGTGAAACAAGGCCTTCTTGCTGGGAGAATTCCTGGTCTGTCCGAACCAGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAGAAGTCTGGTGGACATGGTGTTGGATGGAGTCCTATTATCCCATACTCCTTCAGAGTGCCTCAAGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACAGAGATAGATTTGAGATTTGCCAGCTCTAAGGAAGGACGCTTGTTTGTCATTGTTGCTCCCGTTCTTCGATTTTCAGATGATCTTGGTGATAATGCTACAATAGAAAAAATTGGACCTCCAGAGAAAGTGATCAATGCATTTGGTCCAGAAGTAATCGGCGAAAATGTAGAAGGGAAGGTTCTGAGCTCTAATGTAGCAGAACATGAAGGAAGAAAGTATTACCAGTTTGAGCTAGAGCCTCCTCACATTTTCATTACTGCCACTGCAGCTGGCAATCGCTTATATTTGTTTGGCGTAACAGGCAGTGGTCTTCAGTGGAAGAGACACTACGATGATTTAAAGAAGATAGCTGAGTCTTTTCGGGTTGTATAA 810 0.463 MATALSTTSVLCWRNPQNLLVMPSSHTPCYSSQQIGILRTVAALAAEGRESEKFSSLLVTRRTVLASGVSLLGFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPQEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEVIGENVEGKVLSSNVAEHEGRKYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYDDLKKIAESFRVV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02382 269 PANTHER - 38 268 - -
Vimu10g02382 269 Pfam PsbP 125 268 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vimu10g02382 269 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 122 269 - -
Vimu10g02382 269 SUPERFAMILY Mog1p/PsbP-like 117 268 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02382 - - pvu:PHAVU_009G134500g 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02382 10 34702084 34703977 Vimu10g02382 10 34702084 34703977 ECH