Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02360 ATGGGGAACGAATGGCGGGGAGAATCCAACAATAGAGAACGGGGCACAGAAGTAAAAAGGGGGAGCAAATGTAGGCGACAAGTGAGAAGTAACGTTGTAAACAATAACGAAGGCGAACAATGGCTGACGCCAAGTGAACCCAGCTATGAAGGAGAAGCAGAGCAGAAGGTGAAAAGCCACACAGAAAGAAATATCAATCGAAAGGCAAAAGCATCTGTCATGGAGATTGAAGTTCCTGTTGTGATTGTGGGAGCAGGCCCTGCTGGTCTTGCAACCTCTGCATGTCTCAACAAACTTTCAATCCCCAATCTTGTCCTTGAAAGAGATGATTGCCATGCATCTCTTTGGAGGAAAAGAACATATGACCGATTGAAACTTCACTTGGGCAAAGATTTCTGCAGCCTCCCTCACATGCCCTTCCCTTCTGATTTCCCCACCTTTGTCCCCAGGATTGACTTCCTCCGTTACTTGGATAGCTATGTCTCTCGTTTCAAGATTTCCATTCGGTATAATAAGAATGTCGAATCTGCCTATGTTGATCATAACACTGGCAAATGGAGGCTTATTGTCAAGGACACAGCATCAGATGCTGTTGATGTTTACGTCTCTGAGTTTCTGGTCGTTGCATCTGGGGAGAATAGTGAAGGCTATGTCCCCAAGGTTGAAGGGCTTCAAAGGTTTGAAGGAGAATACATGCATTGCAGCAACTACCTCAACGGAAGGGACATGTATGGCAAAAATGTCCTCGTTGTTGGCTGTGGAAATTCTGGCATGGAGATAGCTTACGATCTCTCAAATTGGGGTGCAAATACTTCCATTGTCGTTAGAGGCCCTGTTCACTTTTTCACTAAAGAAATGGTGTTCGTGGGAATGACCTTGCTGAAATACTTGAAAATTGAGAGAGTGGACAAGCTTATGATGCTTATGAGCAAGCTCAAGTACGGAGATATGTCTAAGTACGGTTTGGTGAGGCCAAAAGATGGACCGTTCGCTTTGAAGAGAAAAGGTGGTACTACTCCAACCATTGATGTTGGTTGCGTTGGTAGGATCAAGAAAGGCGAAATAAAGGTTTTCCCAGCTCTTTCAAGCATCAAAGAGGGCAAGACGGTTGAGTTTGATGATGGAAGAGATGCAGAATTTGACATCATCATCTTTGCTACTGGATACAACAGCACTGTGCTGAAGTGGCTTAAGGATTATAGAGAACTGTTCAACAGTAATGGAATGCCTAAGCCAGGTTTTCCAAATCACTGGAAGGGAGAGAATGGTCTGTACTGTGCTGGATTTTCAAGAAGGGGATTAGATGGCATTGCTTTTGATGCACAGCGTATAGCTAATGATATCAGTATGACTACAACTGCAAGAGGTCCCGATGGTGACGATGCCAACTTAGCTTCCCTCAAACTCATTCAGAAATAA 1419 0.4433 MGNEWRGESNNRERGTEVKRGSKCRRQVRSNVVNNNEGEQWLTPSEPSYEGEAEQKVKSHTERNINRKAKASVMEIEVPVVIVGAGPAGLATSACLNKLSIPNLVLERDDCHASLWRKRTYDRLKLHLGKDFCSLPHMPFPSDFPTFVPRIDFLRYLDSYVSRFKISIRYNKNVESAYVDHNTGKWRLIVKDTASDAVDVYVSEFLVVASGENSEGYVPKVEGLQRFEGEYMHCSNYLNGRDMYGKNVLVVGCGNSGMEIAYDLSNWGANTSIVVRGPVHFFTKEMVFVGMTLLKYLKIERVDKLMMLMSKLKYGDMSKYGLVRPKDGPFALKRKGGTTPTIDVGCVGRIKKGEIKVFPALSSIKEGKTVEFDDGRDAEFDIIIFATGYNSTVLKWLKDYRELFNSNGMPKPGFPNHWKGENGLYCAGFSRRGLDGIAFDAQRIANDISMTTTARGPDGDDANLASLKLIQK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02360 472 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 79 451 - -
Vimu10g02360 472 MobiDBLite consensus disorder prediction 1 24 - -
Vimu10g02360 472 Pfam Flavin-binding monooxygenase-like 80 390 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vimu10g02360 472 MobiDBLite consensus disorder prediction 27 43 - -
Vimu10g02360 472 SUPERFAMILY FAD/NAD(P)-binding domain 244 434 IPR036188 -
Vimu10g02360 472 SUPERFAMILY FAD/NAD(P)-binding domain 80 307 IPR036188 -
Vimu10g02360 472 PRINTS FAD-dependent pyridine nucleotide reductase signature 247 265 - -
Vimu10g02360 472 PRINTS FAD-dependent pyridine nucleotide reductase signature 80 99 - -
Vimu10g02360 472 Gene3D - 76 455 IPR036188 -
Vimu10g02360 472 PRINTS Pyridine nucleotide disulphide reductase class-II signature 79 101 - -
Vimu10g02360 472 PRINTS Pyridine nucleotide disulphide reductase class-II signature 243 267 - -
Vimu10g02360 472 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02360 Vimu-Chr10 34390865 34395817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02360 K11816 - gmx:100801203 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02360 10 34390865 34395817 Vimu10g02360 10 34390865 34395817 ECH