Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02340 CTCTGTTATGCATCTTCAATGGCATCTCATTCTGCTTACAATGCCTTTTTATTTTCACCAACCAACCATATCATGCATAAGCCATCATCCACAAGATGCAGACCCTTCCTCTTCTCTATCACCAACGCCACACCATCCTACAATACCCTTGTTTCTGAGGCTGTTAGGCTCTTGGTTCCAACAGCAAAATTTGAAGCTTCCAAACTGAAGGTTGTTCTATTAGAAGATCAGATAAACGAATACGCAAGTATTCTTCCCAGAACCTACATTCTTTCCCATTGCGACTTTACAGCTAATCTGACTTTAGCAGTGTCCAATGTGATCCACCTAGAACAGTTGAGAGGGTGGTACGAGAAGGATGATGTTGTAGCTGAATGGAAGAAAGTGCAAAATGAAATGTGCCTACATGTACATTGCTTTGTCAGTGGTCCCAATTCCTTCTCGGACCTGGCTGCTGAATTTAGATATCACATATTCTCCAAGGAAATGCCTCTGGTTCTGAAAGCAATTCATTTTGGAGATTCTGCACTTTTCCGTGAGCATCCCGAATTGCTGGATTCTATAGTTAGAGTATATTTTCATTCTAACTCACAAAATTACAACAGAATGGAATGTTGGGGACCTCTCAAGGTTGCAATGGAGGGAAAACAAGCAGACAAGTTCAAAGGGTCAATAAGTAGAGATAATCCCGAAAAGTGGCGGAGCCCAAAGTCCATTTTTCAAGCTCTTTTTGCTTTTCTTCTTTGA 747 0.4123 LCYASSMASHSAYNAFLFSPTNHIMHKPSSTRCRPFLFSITNATPSYNTLVSEAVRLLVPTAKFEASKLKVVLLEDQINEYASILPRTYILSHCDFTANLTLAVSNVIHLEQLRGWYEKDDVVAEWKKVQNEMCLHVHCFVSGPNSFSDLAAEFRYHIFSKEMPLVLKAIHFGDSALFREHPELLDSIVRVYFHSNSQNYNRMECWGPLKVAMEGKQADKFKGSISRDNPEKWRSPKSIFQALFAFLL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02340 248 Pfam Staygreen protein 63 210 IPR024438 -
Vimu10g02340 248 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 28 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02340 Vimu-Chr10 34191214 34194105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02340 K22013 - gmx:100795181 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02340 10 34191214 34194105 Vimu10g02340 10 34191214 34194105 ECH