Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02338 ATGGTGCTGGGGAAGAATTCCCGAGGCGAGGGGACGAAGTTGTCAAACTACTGTTCAACGGTTTCTGTAGCTGTGTTCGTTGCATTTTGTTTGGTTGGTGTATGGATTATAATGTCAACCATTGTTCCAATTCAGAATCCAGTCATTCAGGTATCTGAGACCATTAGTGATGTAAAAGATGTACAGAGTGATTCCAAGCAATTTGAAGAAAGATCTGGTGATATACCAGAAGAATCAATAGAGGGAGATAGCCAGACTCTTAAACCTCAGAGCGATAGCTTTGCAGAAAGCCAGAATGAGCAAAAGGAAATTGGAGAAGTGTCTGATAAAATGGCTAATGAAAACCAAGAGGTTGTTAGGGAGAGCTCAGATGAAAAGAATGATTTTGAGAAGGATCCCGGGAATACTGCTGAGGAGAATGATCAAATGAGGAATGTCAAGCCGAGCACTGACGAGAAGGAGAAAGAATCAGATGGAACATTAAATTCTGACTCTGCAGAAACTGAAACTTTGAATGGTGAAATTCATAATGATGAGCTCAGAGGATCAGTGGAAACTTTAGATGAAAAGGAATCTGACAAGAGTGCAAATGATAACAAATTAGGGACAGAAAAAAGTATGGATAAAGTTACACAACAAGATGAGATAGTTAATGAGACTGAAGAGGAGTCAGCAAAGATAAATACACATTCTGAAACAACACAAAGTTCTGGAGAGAGTAACACAGATAGCCATGAAAATAATCAAGCTTCAAAAAACGATTTTATTACTGATACACAATCAGAAACTTTGATTGAAACTAGCGCTGAAAATGGAACCTGGTCAACTCAAGCCACAGAGTCACAACATGAGAAGGAATCACAGAAGTCTTCAGTTTCTATTGACAGCAGAAGGTATGATTGGAAACTTTGTAATACAACTACCGGATCAGAGTATATTCCTTGCCTTGACAATTGGCAAGCAATTAGAAGGCTTCAAAGCATAAGGCACTATGAGCATCGTGAGAGACACTGTCCTGATGAAGCTACCACTTGTCTTGTTTCTCTGCCCGAGGGCTATAGAAGCCCAATTAGGTGGCCCAAAAGCAGGGAAATGATATGGTACAAAAATGCCCCACACACAAAGCTTGTAGAAGTTAAGGGTCATCAAAACTGGGTTAAAGATGCTGGTGAATACCTTACTTTTCCAGGTGGTGGAACTCAATTTAAACATGGGGCTCTTCATTACATAGAATTCATTCAGAAATCTCTTCCTAAAATTGCGTGGGGGAAGAGAAGTCGAGTGATATTGGATGTTGGGTGTGGGGTAGCCAGCTTTGGAGGCTATCTGTTTGAAAAAGACGTGCTGACCATGTCATTTGCTCCTAAAGATGTGCACGAGGCACAAGTACAATTTGCTCTGGAACGGGGAATTCCTGCTACACTAGGTGTCATGGGCACCATAAGATTACCCTACCCAGCTTCTGTCTTTGATCTTGTCCACTGTGCTCGTTGTAGAGTTCCTTGGCATTTAGAAGGTGGCAGGTTACTCTTAGAGCTTAACCGTGTCTTAAGACCTGGAGGATACTTTGTATGGTCTGCTACTCCAGTCTACCAAAAGGATCCAGAAAGTGTTGAGATTTGGAAAGCGATGGGTGAAATTACAGTGTCAATGTGCTGGGATCTGGTGGTAATTGCAAAGGACAAATTGAATGGAGTGGCAGCAGCAATATATAGAAAACCAACTGACAATGAATGCTATAACAACAGAATAAAAAATGAGCCACCCATGTGCAACGAATCTGATGATCCAAATACAGCCTGGAATGTATCACTACAGACTTGTATGCACAAAGTGCCCATTGATGCATCAGAGCGTGGATCAATCTGGCCTGAGCAATGGCCACTAAGGTTGGAGAAACCACCTTACTGGATAAACTCTCAGGCAGGTGTTTATGGAAGAGCTGCTGCGGTGGAATTCACTGCTGACTACAAGCACTGGAAAAACGTTCTATTCCGCTCATATTTGAATGGAATGGGCATCAATTGGTCTTCAGTAAGAAATGTGATGGACATGAGAGCTGTTTATGGAGGGTTTGCTGCAGCACTCAGAACCCTGAAAGTGAATGTCTGGGTAATGAATGTGGTTCCGATTGATTCTCCGGACACACTGCCTATAATATATGAGCGTGGATTATTTGGTATCTATCATGATTGGTGTGAATCATTCAATACATACCCTAGATCCTATGATCTTCTTCATGCAGATTCTATATTATCAACACTTAAGAAAAAGTGCAACATAGTGGCAGTGATTGCAGAAGTGGATAGGATCCTAAGACCAGAAGGTTATTTGGTGGTAAGAGACAATGCTGAAACTATTGGTGAGATAGAAAGCATGGCTAAGTCTCTAAACTGGGATATTCGGCTGACATATTCAAAAAATGGGGAAGGATTACTTTGCATTCAGAAGACATTCTGGCGTCCAACAAAGGTTGTAACAATTGCATCAGCCATTGCATGA 2502 0.4141 MVLGKNSRGEGTKLSNYCSTVSVAVFVAFCLVGVWIIMSTIVPIQNPVIQVSETISDVKDVQSDSKQFEERSGDIPEESIEGDSQTLKPQSDSFAESQNEQKEIGEVSDKMANENQEVVRESSDEKNDFEKDPGNTAEENDQMRNVKPSTDEKEKESDGTLNSDSAETETLNGEIHNDELRGSVETLDEKESDKSANDNKLGTEKSMDKVTQQDEIVNETEEESAKINTHSETTQSSGESNTDSHENNQASKNDFITDTQSETLIETSAENGTWSTQATESQHEKESQKSSVSIDSRRYDWKLCNTTTGSEYIPCLDNWQAIRRLQSIRHYEHRERHCPDEATTCLVSLPEGYRSPIRWPKSREMIWYKNAPHTKLVEVKGHQNWVKDAGEYLTFPGGGTQFKHGALHYIEFIQKSLPKIAWGKRSRVILDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPATLGVMGTIRLPYPASVFDLVHCARCRVPWHLEGGRLLLELNRVLRPGGYFVWSATPVYQKDPESVEIWKAMGEITVSMCWDLVVIAKDKLNGVAAAIYRKPTDNECYNNRIKNEPPMCNESDDPNTAWNVSLQTCMHKVPIDASERGSIWPEQWPLRLEKPPYWINSQAGVYGRAAAVEFTADYKHWKNVLFRSYLNGMGINWSSVRNVMDMRAVYGGFAAALRTLKVNVWVMNVVPIDSPDTLPIIYERGLFGIYHDWCESFNTYPRSYDLLHADSILSTLKKKCNIVAVIAEVDRILRPEGYLVVRDNAETIGEIESMAKSLNWDIRLTYSKNGEGLLCIQKTFWRPTKVVTIASAIA 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02338 833 Coils Coil 97 117 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 269 292 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 171 228 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 229 255 - -
Vimu10g02338 833 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 334 588 IPR029063 -
Vimu10g02338 833 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 652 800 IPR029063 -
Vimu10g02338 833 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 821 IPR004159 GO:0008168
Vimu10g02338 833 MobiDBLite consensus disorder prediction 102 162 - -
Vimu10g02338 833 FunFam Probable methyltransferase PMT25 401 566 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 59 78 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 59 255 - -
Vimu10g02338 833 MobiDBLite consensus disorder prediction 83 101 - -
Vimu10g02338 833 Gene3D Vaccinia Virus protein VP39 400 555 IPR029063 -
Vimu10g02338 833 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 311 810 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02338 Vimu-Chr10 34171885 34177372 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02338 - - gmx:100793395 1482.23