Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02333 ATGGATTCAGGTTTGTTGCGATCAGAAGGTGGTGTCGTGTCCCACTTGCCCACGAATTTCGTTTGGCCAAAGGAATATTTGGTGGATGCCCAAGGCGAGCTCCAAGTACCATTGGTGGACCTTGATGGGTTTCTGAGAGGGGAGGAAGAGGCCACACAATGTGCTGCAAAGCTCATAAGGGAAGCGTGTTTGAACCATGGCTTTTTCCAAGTTATCAACCATGGGCTTGATTCATGCCTCATTCGTCAAGCACATCATCAAATCGACACTTTCTTTAAGCTCCCAATTCACAGGAAGTTGAATGTTCACAAGACACCAGCTTCCATGTGGGGCTACTCTGGTGCACATGCTCATCGCTTCTCCTCCAAATTGCCATGGAAGGAAACCCTCTCTTTTCCCTACCATGACAACACCTCCGAACATGTTGTAACCAACTACTTTAAATCCACCATTGGAGAAGACTTTGAACAAGCTGGAGTGATATTCCAGAAGTACTGCGATGGTATGAAGCAGTTGGGGTTGAAGCTGACGGAGCTATTGGCCATAAGCTTAGGCGTGGATCGGTTGCATTTCAGGGAGTTGTTCTCAGATGGATGCTCCATCATGAGATGCAACAACTACCCATCTTGCCAACAACCGAACCTTACGTTGGGGACAGGACCACATTGTGATCCAACATCAATAACCATACTTCACCAAGATCTTGTTGGGGGACTTGATGTTTTTTCGGACAACCAGTGGAAGACGGTTCCACCTCGTCTCGATGCCCTTGTAATCAACATTGGAGACACCTTCATGGCATTATCAAATGGGAAATACAAAAGTTGCGTGCATAGGGCAGTGGTTAACAAGTACAAGGAGAGGAAGTCGTTGGCGTTCTTTCTGTGCCCTAAAGAAGACAAGGTATTGAGAGCCCCAGATGAAGTTATTGAGATGGATGGGACGAAGCAATATCCCGATTTTACATGGTCAGATTTGCTTCATTTCACGCAAAACCACTACAGAGCAGACCAAGCTACTCTGCCAAACTTCTTCAACTGGTTCCTATCTTCCAAAACTACACACTAG 1068 0.4635 MDSGLLRSEGGVVSHLPTNFVWPKEYLVDAQGELQVPLVDLDGFLRGEEEATQCAAKLIREACLNHGFFQVINHGLDSCLIRQAHHQIDTFFKLPIHRKLNVHKTPASMWGYSGAHAHRFSSKLPWKETLSFPYHDNTSEHVVTNYFKSTIGEDFEQAGVIFQKYCDGMKQLGLKLTELLAISLGVDRLHFRELFSDGCSIMRCNNYPSCQQPNLTLGTGPHCDPTSITILHQDLVGGLDVFSDNQWKTVPPRLDALVINIGDTFMALSNGKYKSCVHRAVVNKYKERKSLAFFLCPKEDKVLRAPDEVIEMDGTKQYPDFTWSDLLHFTQNHYRADQATLPNFFNWFLSSKTTH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02333 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 36 139 IPR026992 -
Vimu10g02333 355 SUPERFAMILY Clavaminate synthase-like 13 336 - -
Vimu10g02333 355 PRINTS Isopenicillin N synthase signature 257 283 - -
Vimu10g02333 355 PRINTS Isopenicillin N synthase signature 59 76 - -
Vimu10g02333 355 PRINTS Isopenicillin N synthase signature 222 243 - -
Vimu10g02333 355 FunFam Gibberellin 20 oxidase 2 11 335 - -
Vimu10g02333 355 Gene3D - 5 335 IPR027443 -
Vimu10g02333 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 36 326 - -
Vimu10g02333 355 Pfam 2OG-Fe(II) oxygenase superfamily 201 297 IPR044861 -
Vimu10g02333 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 297 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02333 Vimu-Chr10 34089593 34091850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02333 13 335 Glycosyltransferase AT5G59530 26.140 2.21e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02333 K05282 - gmx:100776707 624.009