Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02323 ATGCTGTTGGAGAACGGCCAAGACCACCTGTTTCGAGATTGGCCTCCTCCCGGCGTCGACGACGACCACAAGAAAGCGTTCTTCGATCAGTTGACTCTACTCGATTCGAGTTACCCTGGCGGTTTGGAATCATACATCAAAAACGCTAAACGGCTCTTGGCGGATTCTAAGGCTGGCAAAAACCCTTACGATGGTTTCACTCCTTCCCATTGCGCTTTGAAGTGTACTATTTTCTTCCGTGATAATGTTCGAATTCTCGGTTTAACCATGGGAAAATGCGTTCCAACGGGTGAGACTTTGACTTTTGGCGATGAGAATTACATCAACTTTGAGGAAACAGGTGTGCGTGAGGCTCGGAAAGCTGCATTTGTTCTTGTTGCTGGTGGTCTTGGTGAGCGTTTAGGATACAGTGGGATTAAGGTTGCTCTTCCTGCAGAAACCACTACTGGAACATGTTTCATTCAGCATTACATTGAATCTATATTGGCTCTTCAAGAAGCCAGCTCACAAGGTAGTATCAGTTGCTTATGTGGTGAATCCCAAACTAAGATTCCTCTTGTTATTATGACATCTGATGACACTCATGGACGCACTTTAGAGCTATTAGAATCAAATTCTTATTTTGGTATGCAACCCACACAAGTAACACTTTTAAAGCAGACAAAACCTCATGGGCATGGTGATGTGCATTCACTTCTTTATTCAAGCGGGATTCTGAAAGTATGGTATGATGCTGGGTTGAAATGGGTTCTATTTTTCCAAGATACAAATGGGCTTCTGTTCAAGGCAATTCCAGCAGCATTGGGTGTCAGTGCTTCCAAACAGTACCATGTTAACTCTCTTGCGGTACCTCGGAAAGCAAAAGAAGCTATTGGTGGAATCACCCGACTCACTCACTCTGATGGAAGGTCTATGGTGATAAATGTGGAGTACAATCAGCTAGATCCTCTTCTCAGAGCAAGTGGATACCCTGAAGGCGATGTAAATTGTGAGACTGGCTTCTCCCCGTTTCCTGGAAATATTAACCAAATGATTATTATTCTTATCCGCATTGCTCTCAAACACCACATGGCTTTGATAACATGTGACAATATCTTATTCAAACAGTTGATTTTAGGGCTGGGTCCTTACATTGAAGAACTCTCAAAAACAGGAGGTGCCATACAGGAATATAAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATGTATGATGCAAGACTATCCAAAAACATTGTCCCCATCTGCCAGGGTTGGGTTCACGATGGAGTCCCGTCATGCTACTTTGTTAATGGATGTTCGGCTGTTATACTTGGTGATGGAAACATGGCTTGCTTATGCACCTGTGAAGAATAATGCTGAGGATGCTGCTAAGGGGAAGAATGCGGTTTTAGCCCTTGATTCCCTATTGAAGTGTATGCAATTCTTAATTGAACTAGACTGGAAAGGTGTACCGAAGGGAAATCCATACCATAGTGCAACCTCTGGAGAAATGGCAATCTATCGTGCAAATAGCATTATTCTCAAAAAGGCCGGTGTCCAAGTAGCAGAGCCAGTTGTACAGGTCTTCAATGGCCAAGAGGTTGAAGTTTGGCCTCGCGTAACATGGAAACCCAAATGGGGTCTAACTTTTTCTCGGATTAAGAGCAAAGTCAGTGGAAATTGCTCCATTTCTCAAAGGTCTACACTGGCCATCAAGGGTCAAAATATTTTTATTGAAAATCTGTCGTTAGATGGGGCTCTCATCATTGATGCTGTGGATGATGCAGAGGTAAACGTGAGTGGTTCAGTTCAAAACAATGGTTGGATCCTTGAAACTGTTGATTACAAAGATACGACGGAGCCTGAGGTATTGAGAATCAGGGGTTTTAAATTTAACAAAACTGAGCAGCTGGAAACGAAATACTCTGAGCCAGGAAAATTTCACTTGAAGGCTTGA 1950 0.4303 MLLENGQDHLFRDWPPPGVDDDHKKAFFDQLTLLDSSYPGGLESYIKNAKRLLADSKAGKNPYDGFTPSHCALKCTIFFRDNVRILGLTMGKCVPTGETLTFGDENYINFEETGVREARKAAFVLVAGGLGERLGYSGIKVALPAETTTGTCFIQHYIESILALQEASSQGSISCLCGESQTKIPLVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQTKPHGHGDVHSLLYSSGILKVWYDAGLKWVLFFQDTNGLLFKAIPAALGVSASKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSMVINVEYNQLDPLLRASGYPEGDVNCETGFSPFPGNINQMIIILIRIALKHHMALITCDNILFKQLILGLGPYIEELSKTGGAIQEYKDASKTSFKSSTRLECMMQDYPKTLSPSARVGFTMESRHATLLMDVRLLYLVMETWLAYAPVKNNAEDAAKGKNAVLALDSLLKCMQFLIELDWKGVPKGNPYHSATSGEMAIYRANSIILKKAGVQVAEPVVQVFNGQEVEVWPRVTWKPKWGLTFSRIKSKVSGNCSISQRSTLAIKGQNIFIENLSLDGALIIDAVDDAEVNVSGSVQNNGWILETVDYKDTTEPEVLRIRGFKFNKTEQLETKYSEPGKFHLKA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02323 649 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 222 621 IPR039741 -
Vimu10g02323 649 FunFam UDP-sugar pyrophosphorylase 517 637 - -
Vimu10g02323 649 Pfam UTP--glucose-1-phosphate uridylyltransferase 114 221 IPR002618 GO:0070569
Vimu10g02323 649 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 221 IPR029044 -
Vimu10g02323 649 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 363 484 IPR029044 -
Vimu10g02323 649 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 362 IPR029044 -
Vimu10g02323 649 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 589 IPR029044 -
Vimu10g02323 649 Gene3D - 517 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02323 Vimu-Chr10 33907993 33915664 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02323 K12447 - gmx:778158 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02323 10 33907993 33915664 Vimu10g02323 10 33907993 33915664 ECH