Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02314 ATGTTCCTGATAGCGTCATCGACGGGGACATCATCAGAGGCGAAAATGACCTTAGAGGGGTCGTGGTTGGAGAAGGATCGGAGGGATAAGTCGTTGTTGGTGCGCGATTGGCGGAGGGAGGGAAGAGAGAGGAAGGACCGACGAATGGAGGCATTAGGGGGGAGGGAAGGAGGGTCTAGGGTTTTGTCTCGAAGGCGGAGGGATGGAAGTTGTGATACTGTATGTTTGAATCCCGCGCGATTCCCTTGTTATCTGTCGAATGTTTCTCTCTCGCGCCCTAATTATCGAATCTCTGTATCGTCGGTGAATTGGATTCACATGGCGGAGGAGAAGAGGGCGTCGTCGTCGTTCGTGAAGAAAGGTGACCGGCAAATGTTCACGGTGGAGCTCCGTCCTGGTGAGACGACCATAGTTTCGTGGAAGAAGCTGATGAAGGACTCTAGCAAGCCTAACGGATCCAATTCGGCACCGCAACAAGTCGCAATCGCTCCGGGTGAACCTGTTGATGTTGAAGAAAATGATCCCTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGCAAGGATAGTAGTGATGATGAGGATCTGCTTGATGTTCCTGATGATGATCAATATGATACCGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAACTGGAACGCATAAATGAACCTGCTGCACTACCTAACCAGCAACCAAAGAAAAGGCGCAGAAAAGATATAATGAAGAATGGTGAAAACAATGATGGTCATGGATCAAATAAAAATGTAAAAGTTGGCAGGCCAGCATCTGGCAAAACAGCTTCACTGCACGCAAAAAATATGTTAAATTTATCTGAGAATTTGGTTGCACCTGATGAACATTATGAAGACTTGAAACTTTCAAATCAGTCAGATGTCTCTGGAATTATTTCAAAAAAGAAAACTGTTGATACTAAACCGACATTGGACCCTTCCATCTCTTTGAAAACATCAAATGATGATGTTCCTGGTGTAACAGATGCAAAAGATGCTGACAAGCAAAGGATAGGAGTTTTTCAATCTAAGAACATTAGTGATAAATGTAAAGATGGGAGTGGATCATTTGATGCATCTCATCAGAAGTACAATGAGAAAAGTGCTTATGCACATTCCAAATCCCAACCTGGAAGACCCCCAAATAGTATTGATGATTTGGAAAATATTATTAGGACAAAAGAAAAAAGTGGTATGTGTGAATTGCCAGATCTTAACCTGTCTGAGGGGAAGTCTGCTACCCAAGCAACAAAATCTGAAAACACGCAGAAGAAAGAGGGTTCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTCTTCGTGAGTTGGAAAAAATGGTTGCTGAATCCAGGCCACCAGCAGTGGACAACCAGGATGCTGTCAAAAGGAGGTTGCCTAGAGATATAAAGCTAAAGCTTGCTAAAGTTGCTAGACTGGCGGCAACCCATGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGCCATCTGATTCAGCTAAGAACATTAAAGTGTGGTTTAGGCATATTTAGGTTCGTGAAAGTGCTTATCTTCTCATACAGTGTTTTTCTACTGCAGAGAAACTTAAAAATAATGATCAGTATGGGCCTGTCAGCAAAGCAGGAGGAGGATAATAGGTTTCAACAAATAAAGAAAGAAGTTATGGACATGATTAAGATGCTGCCCCCAACTTTTGAATCCAAGCAGCAGCTGAAAGGTGAAGCATCTGGTGATTTTCAAGAATTTGGTCCTGATGGAAAAACTAATACAAAAAGAAAGTTTGCCATGGATGCTGCATTGGAGGACAAGATCTGTGATCTCTACGATATTTTTGTCGATGGGTTGGATGAAAACGCAGGTCCACAGATCAGAAAGTTGTATGCTGAGCTTGCAGAACTATGGCCCAGTGGTCACATGGACAACCATGGGATCAAACGCGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTGTACAACAAGCATAAGGACCAGGAAAAAATTAAGAGGAAAAAGTTGCTGGCACCTAAGCAAGAGGAGAACGTTCGATTTGATGCCATTTCAATTACTTCACAACAGAACCTGCGAGAGAGATCAGCTCCCGAGTCCAGCAGTCATGGTTTTACTTCAGGGAGCAAGCAAGTTTCTAATGCAAGCCCAACTGGCCGGGTACCCAGTCCAATAAATGGTCTAAAACAAGAAAAAGCAAAGGGAAGTTCAAGCAGTTCCGTGGATGATGTCAGGGTTGCAGAAGGTGTGCTAACAAAGAAGGTAAAGAGAAAACCAGAACTTGAGTTAGAAGCACATTTAGTTGCTGAGAAGGTGGCTTCCTTGCAGGGAGAAGAAAGACCTAGGTCCTTAAAGCAGCAGTCCTCAGGGCCACTTTCCAACAAATCAAGTCTTCAGCCAACATCTGTTCCTGATCTTCAACATTCAAGCTAA 2556 0.4327 MFLIASSTGTSSEAKMTLEGSWLEKDRRDKSLLVRDWRREGRERKDRRMEALGGREGGSRVLSRRRRDGSCDTVCLNPARFPCYLSNVSLSRPNYRISVSSVNWIHMAEEKRASSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDSSKPNGSNSAPQQVAIAPGEPVDVEENDPSQPNRFSAVIEKIERLYMGKDSSDDEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPAALPNQQPKKRRRKDIMKNGENNDGHGSNKNVKVGRPASGKTASLHAKNMLNLSENLVAPDEHYEDLKLSNQSDVSGIISKKKTVDTKPTLDPSISLKTSNDDVPGVTDAKDADKQRIGVFQSKNISDKCKDGSGSFDASHQKYNEKSAYAHSKSQPGRPPNSIDDLENIIRTKEKSGMCELPDLNLSEGKSATQATKSENTQKKEGSSVRPKTSMLEKALRELEKMVAESRPPAVDNQDAVKRRLPRDIKLKLAKVARLAATHGKVSKELINRLMSILGHLIQLRTLKCGLGIFRFVKVLIFSYSVFLLQRNLKIMISMGLSAKQEEDNRFQQIKKEVMDMIKMLPPTFESKQQLKGEASGDFQEFGPDGKTNTKRKFAMDAALEDKICDLYDIFVDGLDENAGPQIRKLYAELAELWPSGHMDNHGIKRGICRAKERRRALYNKHKDQEKIKRKKLLAPKQEENVRFDAISITSQQNLRERSAPESSSHGFTSGSKQVSNASPTGRVPSPINGLKQEKAKGSSSSSVDDVRVAEGVLTKKVKRKPELELEAHLVAEKVASLQGEERPRSLKQQSSGPLSNKSSLQPTSVPDLQHSS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02314 851 MobiDBLite consensus disorder prediction 441 456 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 728 851 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 251 295 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 431 467 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 821 851 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 342 356 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 728 764 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 337 364 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 788 819 - -
Vimu10g02314 851 MobiDBLite consensus disorder prediction 259 274 - -
Vimu10g02314 851 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 113 845 - -
Vimu10g02314 851 Pfam HPC2 and ubinuclein domain 206 248 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02314 Vimu-Chr10 33791809 33803633 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02314 - - gmx:100793966 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02314 10 33791809 33803633 Vimu10g02314 10 33791809 33803633 ECH
Vimu1g02325 1 33763936 33764804 Vimu10g02314 10 33791809 33803633 PCT