Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02297 ATGGCCAGGGCATCGACAAAGCGACCTCCAATTGTCTCGGATTCCCCAACACGCTCTAATTCCAAATCCACCCTAAACGGATCCCCATCTCCCCAAAGTTCCTCTTTTGATTTCAATTTCAATTACGGAGTTTTCAGCAACAGCAGCAGCAGCAGCGATAGCAAAACGCAGCATTTCGATGATATCTTCGGCGGTAACGCCAAATCCAACGGCGCTTCTTTTGACTACGATTCCATATTCGCCGGATCTAATAAACCGGTTTCCACGTCGTCTTATGTGGATGACATATTCGGTGGGGTGCAGGCGAAGAGTGTCGGCGTTGATGATCTGCTAGATAAGATGGGTGGATTAAATACAAACACCAACAATCGAAACTACAAAACACCTGATTCTGATGATTTCATCTCTGGCTTTGGTGTTTTCAATAATGGTGTTGAGATGAATAAGCCAAGTGTTACTCCGAACAAACCTGCTGCCGCGTCCCACGATGATCCCTTTTTGATATTTGAAACCGCTTCAAGCTCGGCGTCTTCAGAATCATTCCTGGACTCGCTGGGGCAGAAAACTAAGTTAAATAATTCTAAAGGGCCAAAAGGAGGCTCCCCAATACTGAAGTCCCCTCCCAGGCCAATGAGTAAAGTTAATAGGTCAAATATATCATCAATAGATGAGTTTGAGAGTTTTGTCATGGGTGGGGCACGGACTAATGCTAGTAGTAGAAAGGCCAATGTTAACGCTGCAGAGACTAAGCCAAACTCGTCAGTTAAGATAAACAATGGTAAAAGAGTTCCAGATGTGAAAGCGAGTCAGTCAAATGCCGTGGATGATCTTGAATCCATCTTCAGCATGAGCTCTCGATCAAGCAGTGTGCCAAAGTCAAGGACTCCAACTATGGATCACGTGTATAATAAGCAAACGAAGAGCAAAGGGAAACCTGAGGTGTCACCAAGAGTTCCATCAGGATCCCCAGCCAGTGAGATGAAACCTCCCACAATGACCTCTTTTGATGACCTATCACTGATTTTTGGTGGCTCCCCATCATCTGAATTCCAGGAGATTGAAGGTGAAACTGAGGAAAGACGAAAAGCAAGATTAGGACGTCATCAGAGGACACAAGAACGAGCGTTAAAAGCAGTGGCTGATATGAACCAGCGTGATATTCAAACTAAGATGGAGCAAGAAGAGAGGCGGAGAATTGCTGAAAGTGCGGATGTTCAGATAAGGCGCTGGTCTGCAGGGAAAGAAGGCAATATGCGGGCATTGCTGTCAACTCTACAATATGTTCTTTGGCCAGAATGTGGTTGGCAGCCAGTGTCTCTGACAGATATGATAACTTCCGCTGCTGTTAAAAAGGTGTATAGAAAAGCAACTTTATCTATTCACCCAGATAAAGTCCAACAGAAAGGTGCTACCCTGGAGCAGAAATACATAGCAGAGAAGGTTTTTGACATTCTTAAGGAATGTTGGACCAAGTTTAACGCGGAAGAGCTTTCTTAG 1497 0.4482 MARASTKRPPIVSDSPTRSNSKSTLNGSPSPQSSSFDFNFNYGVFSNSSSSSDSKTQHFDDIFGGNAKSNGASFDYDSIFAGSNKPVSTSSYVDDIFGGVQAKSVGVDDLLDKMGGLNTNTNNRNYKTPDSDDFISGFGVFNNGVEMNKPSVTPNKPAAASHDDPFLIFETASSSASSESFLDSLGQKTKLNNSKGPKGGSPILKSPPRPMSKVNRSNISSIDEFESFVMGGARTNASSRKANVNAAETKPNSSVKINNGKRVPDVKASQSNAVDDLESIFSMSSRSSSVPKSRTPTMDHVYNKQTKSKGKPEVSPRVPSGSPASEMKPPTMTSFDDLSLIFGGSPSSEFQEIEGETEERRKARLGRHQRTQERALKAVADMNQRDIQTKMEQEERRRIAESADVQIRRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLSIHPDKVQQKGATLEQKYIAEKVFDILKECWTKFNAEELS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02297 498 Gene3D DnaJ domain 368 497 IPR036869 -
Vimu10g02297 498 SUPERFAMILY Chaperone J-domain 349 495 IPR036869 -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 238 259 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 10 34 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 346 371 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 1 34 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 187 212 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 283 303 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 238 260 - -
Vimu10g02297 498 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 250 496 - -
Vimu10g02297 498 FunFam Auxilin-related protein 1 368 497 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 283 333 - -
Vimu10g02297 498 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02297 Vimu-Chr10 33594138 33601293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02297 - - gsj:114415445 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02297 10 33594138 33601293 Vimu10g02297 10 33594138 33601293 ECH