Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02282 GTTTATTTGTGTTTTCCTTCTTGTACAGATTTTGCTTTGACGGTTTCCTCTGAACTCGAGTCGGTTCTGAGGATGAAGACAGTTGACTATTTTATTACGAGGAGGCCATGGCTTGATCTTTATGGAGTTAATGTTAGACCTGTTGCGCCATTTGGGAGTGCAAGTAGGAGGGCTTACGTGGATCCTGCACTTATACATCGCTCATTACCTGATGAGCTGCTTTTTGAAGTCTTTTCTCGAATGACTCCATATGACTTGGGGAGGGCAGCTTGTGTGTGTCGAAAGTGGAAGTACACAATTCGTAATCCTGTATTTTGGCGCAATGCATGCTTGAAGGCTTGGCAGCTATCTGGGATTGTGGAAAACTATAAGATACTTCAATCAAAATATTATGGGTCATGGCGGAAAATGTGGCTGTTACGACCAAGGTTGCGGACTGATGGTCTTTATGTGAGTAGAAATACCTATATTCGAGCTGGAGTTGCTGAGTGGAAAATCACTAATCCCGTACATGTGGTCTGCTATTTTCGGTACATTAGATTTTTTCCATCTGGGCGATTCCTTTACAAGAATTCATCAATGAAGATCAAGGATGTGGTGAAGTGTATGAATTTTCGATCATCTAAAGCAGACTGTGTTTTTGGTGGCCACTACACATTGTCAGATGACAAGGTTGAAGCTGCAGTCTTATATCCAGGCATGCGGCCTACTGTTTTGAGGATACGCTTAAGGATAAGGGGAACTACAGCAGGGGCTAACAATCGGATGGATTTGATGTCACTCGTTACTAGTGGTGTAAACAGTAGTGAGGCAAGTGTACCTGAGGAGGACATTCTTGGAGTTGTTGAAGGATGGCAGGATGACGAAACACACAACCCAGATGTACCAGCTGTCTCACATAAGAGGGGCATGACCCCCTTTGTCTTTGTTCCGTTTGAAGAGGTGGAGACATCTGTTTTGAATCTTCCGGTGGAGAAAATGGATTATTTTGTGCCTGGTTGA 1002 0.4361 VYLCFPSCTDFALTVSSELESVLRMKTVDYFITRRPWLDLYGVNVRPVAPFGSASRRAYVDPALIHRSLPDELLFEVFSRMTPYDLGRAACVCRKWKYTIRNPVFWRNACLKAWQLSGIVENYKILQSKYYGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSMKIKDVVKCMNFRSSKADCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLRIRGTTAGANNRMDLMSLVTSGVNSSEASVPEEDILGVVEGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSVLNLPVEKMDYFVPG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02282 333 CDD F-box_AtGID2-like 67 110 - -
Vimu10g02282 333 SMART fbox_2 69 109 IPR001810 GO:0005515
Vimu10g02282 333 Gene3D - 60 147 - -
Vimu10g02282 333 FunFam F-box protein 7 55 147 - -
Vimu10g02282 333 ProSiteProfiles F-box domain profile. 63 109 IPR001810 GO:0005515
Vimu10g02282 333 Pfam F-box-like 67 112 IPR001810 GO:0005515
Vimu10g02282 333 Pfam F-box only protein C-terminal region 123 333 IPR045464 -
Vimu10g02282 333 SUPERFAMILY F-box domain 67 145 IPR036047 GO:0005515
Vimu10g02282 333 PANTHER F-BOX ONLY PROTEIN 48-RELATED 49 314 IPR045118 GO:0019005|GO:0031146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02282 K10295 - gmx:100800263 639.802