Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02278 CGTTCTATACTGCAATCAATGGCTTCTTCAATCACTAATGCGCCATCCGCGGTCAATTGCCCGAGCTATGTCGGTCTCCGAGCGCCGCAGAGGACCTTCAACTTATGCGTTCCTCAACCTGCCACGAAGTCGTTCCCTCCGCGCCTTTTCGTCGTGAGAGCGAGCGATTCCGAGTTCGAAGCCGCCGTTGTCGCTGGAAAGGTTCCGTCGGCGCCTCCCGTGCCGCCTAAACCGGCGGCTCCGGTTGGCACTCCGGTGGTCCCTTCGCTTCCACTTCATCGGCGTCCTCGTCGGAACCGGAGGTCGCCTGCGCTTCGGTCGGCTTTTCAGGAAACCAGTATTTCGCCGGCGAATTTTGTGTATCCGCTCTTCATCCACGAAGGCGAAGAAGATACTCCAATCGGAGCTATGCCTGGATGCTACCGGCTTGGATGGAGGCATGGACTTGTAGAAGAGGTTGCAAAAGCACGGGATGTTGGTGTTAATAGTATTGTGCTCTTCCCCAAAATTCCAGATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAAAATGGTTTAGTGCCTCGGACAATTCGTTTGCTCAAGGATAAGTACCCAGACCTTGTTATTTATACGGATGTTGCATTAGATCCTTATTCATCAGATGGGCATGATGGCATAGTTAGAGAAGATGATAATAAGGAACACAAGAAGAGAATAGGAGTTATTATGAATGACGAAACAGTTCATCAGCTATGTAAACAAGCTGTAGCCCAGGCCCAAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCATTGCGTGCAGCTCTTGATGCTGAAGGCTTTCAACATGTTTCTATAATGTCCTATACGGCAAAGTATGCAAGTTCTTTCTATGGTCCATTTAGAGAGGCACTCGACTCCAATCCCCGGTTTGGAGACAAGAAAACTTATCAGATGAACCCAGCTAATTACAGAGAAGCTCTGACTGAGATGCGGGAGGATGAATCTGAAGGAGCTGACATTCTCTTGGTAAAGCCTGGTCTTCCTTACTTGGATATCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATACCAGGTTTCTGGTGAATACGCAATGATAAAGGCTGCTGGTGCTCTCAAAATGATAGACGAAGAAAAAGTTATGATGGAGTCACTGATGTGCCTACGAAGGGCCGGTGCCGATATCATCCTCACATATTCTGCTCTGCAAGCTGCCAGATGTTTGTGTGGAGAAAAGAGGTGA 1284 0.4883 RSILQSMASSITNAPSAVNCPSYVGLRAPQRTFNLCVPQPATKSFPPRLFVVRASDSEFEAAVVAGKVPSAPPVPPKPAAPVGTPVVPSLPLHRRPRRNRRSPALRSAFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSIVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDDNKEHKKRIGVIMNDETVHQLCKQAVAQAQAGADVVSPSDMMDGRVGALRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYAMIKAAGALKMIDEEKVMMESLMCLRRAGADIILTYSALQAARCLCGEKR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02278 427 PRINTS Delta-aminolevulinic acid dehydratase signature 341 357 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 PRINTS Delta-aminolevulinic acid dehydratase signature 366 381 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 PRINTS Delta-aminolevulinic acid dehydratase signature 211 225 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 PRINTS Delta-aminolevulinic acid dehydratase signature 396 415 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 PRINTS Delta-aminolevulinic acid dehydratase signature 289 308 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 SMART ALAD_2 91 422 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 CDD ALAD_PBGS_aspartate_rich 102 423 - -
Vimu10g02278 427 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 341 353 IPR030656 -
Vimu10g02278 427 Gene3D Aldolase class I 84 427 IPR013785 -
Vimu10g02278 427 MobiDBLite consensus disorder prediction 73 107 - -
Vimu10g02278 427 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 73 424 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 SUPERFAMILY Aldolase 89 423 - -
Vimu10g02278 427 Pfam Delta-aminolevulinic acid dehydratase 94 420 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vimu10g02278 427 FunFam Delta-aminolevulinic acid dehydratase 83 427 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02278 K01698 - gmx:548095 685.641