Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02275 AAGACGATGGCGGGTAAAATTGCGATTTGTTCGTCAGTGTTAGTGTTCTTGTTCTTTCTCATTCTAGCACCCCTCTCTCAAATCTCTGCACACGAATCGGAGACTCAGGAGTTCGTTCTCACATTGGATCACTCCAACTTTTCCGACACCGTCAAGAAGCATAATCTGATCGTCGTCGCGTTCTACGCACCAAGGTGTGACCGCAGTAAGAAGCTTGTTCCCGAGTATGAAAAAGCTGCTTCTATTCTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGACGCGGATGATGAGAAGAACAAAGACCTTGCAACAGAATTTGAAGTTAGGGCTTACCCAACAATTAGGATCCTGAGAAATGGGGGAAAGAATGTTCAAGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGCTGAGTATCTGAAGAAACAAAGTGGTCCTGCTTCAGCTGAAATTAAATCTGTAGATGATGCTACCGCAGTTATTGGTGAAGATAAAGTTGCTATTGTTGGAGTGTTTCCGAAATTTTCTGGGGAGGAGTTTGATAACTTCACTGCGTTATCAGAAAAGTTGCGTGCTGACTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAATCATCTGTTGCTGGGCCCATAGTAAGGTTATTCAAGCCATTTGACGAACTTTTTGTTGACTTTCAGGATTTTCATGTGGAAGCTCTAGAGAAATTTGTCGAAGAATCTAGTGTGCCTGTTGTGACTGTCTTTAACGGTGATCTGAGAAATCACCCTTTTATCGCCAAATTCTTCAGTAGTCCCAATACGAAGGTGATGTTGTTTATCAACTTCATTGCTGAAGGTGCTGAAACTTTCAAATCAAAATACCGAGAAACTGCCGAGCAATATAGACAACCAGGTGTAAGCTTTCTGTTGGGAGATGTCAGGTCTACTACAGGTTCTTTCCAGTATTTCGGAGTGAGGGAAGACCAAGTACCTCTAATTTTAGTACAACGTAATGATGGGAAGAAATTTCTTAAACCCAATTTGGAACCTGATCAAATTTCAACTTGGTTCAAGGCATACAAGAATGGAAATATTGCACCATATTTTAAGTCTGAACCTATTCCTGAAGCTAACAACGAACCTGTTAAAGTGGTAGTTGGGGACAGTCTCCAGGACATAGTCTTCAACTCTGGGAAGAATGGTACCGTTTCTATTTGGTTTTATACCACATATTATGAGATGGATTTTGGCATTCCCTGTGCTTGCAAAAAAAAAAAAAAATCACATTTCCAATTTCTGCTGGAGTTTTATTCTCCCTGGTGTATTTATTGCATAGAGTTGACTCCAACATTGGAGGAAGTTGCTGTCTCATATCAAAGTGATGCTGATCTTATTATTGCAAAAATGGATGGAGTTGCCAACGATATTTCAAGTGATTCCTTTGAAGCCAAACGTTATCCAACAGTGTACTTCAGGTCAGCAAGGGGAAAGATATCAAAATACAGTGGCAATAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAATCGGGATAAACCTGCTCATCAAGAACAAGCAACGGGTTACAAAGAAAAAGGAAAAGATGAGCTTTGA 1620 0.4086 KTMAGKIAICSSVLVFLFFLILAPLSQISAHESETQEFVLTLDHSNFSDTVKKHNLIVVAFYAPRCDRSKKLVPEYEKAASILSSHDPPVVLAKIDADDEKNKDLATEFEVRAYPTIRILRNGGKNVQEYKGPREADGIAEYLKKQSGPASAEIKSVDDATAVIGEDKVAIVGVFPKFSGEEFDNFTALSEKLRADYDFGHTLNAKHLPRGESSVAGPIVRLFKPFDELFVDFQDFHVEALEKFVEESSVPVVTVFNGDLRNHPFIAKFFSSPNTKVMLFINFIAEGAETFKSKYRETAEQYRQPGVSFLLGDVRSTTGSFQYFGVREDQVPLILVQRNDGKKFLKPNLEPDQISTWFKAYKNGNIAPYFKSEPIPEANNEPVKVVVGDSLQDIVFNSGKNGTVSIWFYTTYYEMDFGIPCACKKKKKSHFQFLLEFYSPWCIYCIELTPTLEEVAVSYQSDADLIIAKMDGVANDISSDSFEAKRYPTVYFRSARGKISKYSGNRTKEDIIEFIEKNRDKPAHQEQATGYKEKGKDEL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02275 539 CDD PDI_b'_family 268 362 - -
Vimu10g02275 539 Gene3D Glutaredoxin 252 376 - -
Vimu10g02275 539 Gene3D Glutaredoxin 34 146 - -
Vimu10g02275 539 Gene3D Glutaredoxin 147 251 - -
Vimu10g02275 539 SUPERFAMILY Thioredoxin-like 248 380 IPR036249 -
Vimu10g02275 539 Pfam Thioredoxin 39 145 IPR013766 -
Vimu10g02275 539 Pfam Thioredoxin 428 517 IPR013766 -
Vimu10g02275 539 PANTHER PROTEIN DISULFIDE ISOMERASE 14 538 - -
Vimu10g02275 539 SUPERFAMILY Thioredoxin-like 152 251 IPR036249 -
Vimu10g02275 539 Pfam Thioredoxin-like domain 175 359 - -
Vimu10g02275 539 ProSiteProfiles Thioredoxin domain profile. 19 148 IPR013766 -
Vimu10g02275 539 CDD PDI_b_family 151 247 - -
Vimu10g02275 539 FunFam Protein disulfide-isomerase 28 146 - -
Vimu10g02275 539 FunFam Protein disulfide-isomerase 147 247 - -
Vimu10g02275 539 SUPERFAMILY Thioredoxin-like 37 149 IPR036249 -
Vimu10g02275 539 MobiDBLite consensus disorder prediction 515 539 - -
Vimu10g02275 539 Gene3D Glutaredoxin 377 522 - -
Vimu10g02275 539 CDD PDI_a_family 40 143 - -
Vimu10g02275 539 SUPERFAMILY Thioredoxin-like 432 525 IPR036249 -
Vimu10g02275 539 FunFam Protein disulfide-isomerase 248 377 - -
Vimu10g02275 539 ProSiteProfiles Thioredoxin domain profile. 361 520 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02275 Vimu-Chr10 33221427 33228487 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02275 K09580 - gmx:100170705 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02275 10 33221427 33228487 Vimu10g02275 10 33221427 33228487 ECH