Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02268 ATGGTGGGTACCTGGGTGTTGGGCACAAACTCTATTCGTGACCTTTGCAAATCATACAGATCAATCATCAAAACATGGTTTCATGATAAGAAGAAACCAAGAGGCCACAACCGAACAAAACAGAAACCTGTTGAAGATGGCAGAGTCACGAATGGAATTGGCTGCTTCGTGTTCAATTTGAGGAGGAACGTCGGTGATCATCCAATGAGTAGTCCAAGAGGATGTTGTTTATATAGGCATAGAAGTTCAGATAGTTCGTGCTTTCCTTGCATATATTCTTCGTCTCGAAATGCAAGCAGAAAACCCGACCAGACATCGAGCAAGAACTATGATTTTATGTCTGCAGCTTCTTCATTGAACAGAAGCGGGAATTTAAGATCAATGCCTCCTCATCTGAACTCAACGAATGCCGGCAGCGCCAGGTTCAACAACCCAATCATGTATTCCAATTCATCTGGGATGCTGAAACCCCCACCTATCGAGAAAAAACTAGAATGCACTCTGGAAGAGTTGTGCTACGGATGCAAGAAAAAGATGAAGATCACAAGGGATGTCCTTACAGATACAGGGGAAATAGTTCGAGAGGAAGAACTGCTAACGATAAATGTGCAACCTGGATGGAGGAAAGGAACAGAGATTAAATTTGAAGGAAAAGGGAACGAGAGACCAGGAGCATACAGAGAAGATATAGTATTTATTATCTCCGAGAAAAGACACGACTTATTTAGAAGAGACGGGGATGATTTGGTATTGAGAGTTGAGATTCCCTTAGCAAAGGCACTTTCTGGGTGTACGATATTGATTCCACTGTTGGGTGGAGACCACATGAATCTTAAACTTGACGACATCGTACACCCTGGCTATCAGAAGATCGTCCCCGAACAAGGCATGCCTATCTCCAAAGAACCAGGAAACAGAGGAAACTTGAATGTTACGTTTCGAGTTGTGTTTCCGACACATCTCACAAGTAATCAAAGATCAGAGGTTGTTCGTATTTTACAGGATTCTTGA 1011 0.4273 MVGTWVLGTNSIRDLCKSYRSIIKTWFHDKKKPRGHNRTKQKPVEDGRVTNGIGCFVFNLRRNVGDHPMSSPRGCCLYRHRSSDSSCFPCIYSSSRNASRKPDQTSSKNYDFMSAASSLNRSGNLRSMPPHLNSTNAGSARFNNPIMYSNSSGMLKPPPIEKKLECTLEELCYGCKKKMKITRDVLTDTGEIVREEELLTINVQPGWRKGTEIKFEGKGNERPGAYREDIVFIISEKRHDLFRRDGDDLVLRVEIPLAKALSGCTILIPLLGGDHMNLKLDDIVHPGYQKIVPEQGMPISKEPGNRGNLNVTFRVVFPTHLTSNQRSEVVRILQDS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02268 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 159 240 IPR008971 GO:0006457|GO:0051082
Vimu10g02268 336 FunFam Dnaj homolog subfamily b member 156 237 - -
Vimu10g02268 336 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 12 334 - -
Vimu10g02268 336 Gene3D - 239 319 - -
Vimu10g02268 336 Gene3D - 156 238 - -
Vimu10g02268 336 MobiDBLite consensus disorder prediction 121 140 - -
Vimu10g02268 336 Pfam DnaJ C terminal domain 160 318 IPR002939 -
Vimu10g02268 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 242 327 IPR008971 GO:0006457|GO:0051082
Vimu10g02268 336 CDD DnaJ_C 158 321 - -
Vimu10g02268 336 FunFam DnaJ subfamily B member 13 239 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02268 Vimu-Chr10 33143685 33145499 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02268 K09519 - gmx:100782604 403.29