Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02251 ATGGGGGAAAATAGAGGGTCATTGGAGAGAAAATCTTCTGGTGAAACTGAAAATTCAGAGTCTGCATCATTCGTTTCTGAGAACCGACTGGGTGAAGCGCTTGAGGCATTGAATGAATATCCTATTGAGCATAACCAGTCACCCGAAGTCGCCTCAAAAGTTGTGGTCATACCTGAAGATATTAATATGTCATTTTTCTATTCACAATCACCTGAAGTCACCTCACATGCAACAGACAGCGTAAACGATGATTTAACAGATGAAGATGTAAATGGAGCAATGATAAGTATATTAAAGGATAGAGATGAACCTGATGGATTGAGGAATATGTCAGAAAAGTTGTCTGCAGCGCTCGTGAATGTAAGTGCCAAAGAAGATTTGGTTAAGCAACATGCCAAAGTCGCTGAAGAAGCTATTTCAGGCTGGGAAAAGGCTGAAAATGAAGTGACAAGTTTAAAGAAACAAGTCGAAGCACTGACCCTCAGAAATTCAACATTGGAAGATCGAGTCACACATCTAGACAGTGCACTTAGGGAGTGTGTTAGGCAGCTTAGACAAACAAGGGAAGAGCAGGAGCAAAGCATTCATGATGCTGTACTAAAGAAAACACGTGAGCTAGAATCTTCCAAAGCTACACTAGAGAAGCAGCTCATGGAGGTGCAGAGCAAATCAGATTTTTCGAATGCTAGCTCTCCATCATCAATTGATTTTGATAAGTACCAGAAGGTCGAATATTTGGAGAAAGAGAACGCGGTTCTCAAACATGAGCTCCAAGCTCTATCTGAAAAACTAGAACTCAGGACAATAGAGTGGAATTTAAGTACTCAAACAGCCGAGATGGCTAGCAAGCAACATTTAGAAAGCATCAGTAAAGTTGCCAAGCTCGAGGCTGAGTGCCGGAGACTGACAAACATGGCCTCTAGAGCTTCCACTACATCATCCTCTTGTGTTGAATCTCTCAACGATGGCCAATCCAACAGTGGAGAGAGGACAAGAGCTGTGGAGATTGATACAACGAAGAAGAGTGGCTCAGAACCAGACATAGATGAATTAAGTGGTTCTGATTCATGGGCATCTGCGCTAATTGCCGAGCTTGATCAGTTCAAGAATGAAAAGTACAAACAAATTTCATCCGGTTCTGTTAACATTGATCTCATGGATGATTTTCTTGAAATGGAACGACTCGCAGCACTCCCAGATACTAAGAGTGAGAGCTTTATCAAAGAATCACTTGTTGCCAATGATTGCATTCACGAAGAAAGCTCCATCAGAGATGAGTTTGACGCTACCAATCGGCAAATTGATGAACTAAAAGAGAAGCTAGAGAAGGTCAAAGCTGAGAAAGAGGAAGTGAAGACATGTTTAATGAAAAGTGAGAGTGTCATTGAGACATCACAGCTTAAAATGAGGGAGGCAGAAAGAAAATTGGAGGAGTTGCAAAGAGAGCTAGAGAACGCCTATAAATCAAAGCAATTGTTAGAAAATGAACTAACGAGCATGCAGTCCGAGGCTAAATCAATAACTGCAAAAGTTCACTTACTAGAAGCAGAAGTTGATAAGGAAAAGGCCATATCAGTAGAAATTGAAAAAAGGTATAAGGAATTAGAGGAAGAACTAGAAAGAAAGAAGCAGGAAGAGAAATTCGGTTCAATAACCTCTTACAGTGAAATGAAGCTAAAGCAGGAGGACCTAGCATTAGCTGCAGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCGTCTTTGGGGAATCAATTAAGTTCACTAGCAACACTGGAAGATTTCCTGATTGACACTACCTGCATTCCAGAACTTTCTGTAACTCCATCATTCATTGCTAGAGACAGTGCAGTCACGTTGAAGTCGCATTCAAATGGCACATACTCAACTGAAAGAGATTCCGATTCTTCAAGTAAAAATGAAGAAAGCTCACTACCATCCTCATCAACCAACTTGCCAAAGCATGATTCTGAGAAGAGTATAAATGGTTTTGTAAATATTTTCTCTCAAACCGAGAGTGGACTCCAACTAGAAATTTAG 2037 0.408 MGENRGSLERKSSGETENSESASFVSENRLGEALEALNEYPIEHNQSPEVASKVVVIPEDINMSFFYSQSPEVTSHATDSVNDDLTDEDVNGAMISILKDRDEPDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEQSIHDAVLKKTRELESSKATLEKQLMEVQSKSDFSNASSPSSIDFDKYQKVEYLEKENAVLKHELQALSEKLELRTIEWNLSTQTAEMASKQHLESISKVAKLEAECRRLTNMASRASTTSSSCVESLNDGQSNSGERTRAVEIDTTKKSGSEPDIDELSGSDSWASALIAELDQFKNEKYKQISSGSVNIDLMDDFLEMERLAALPDTKSESFIKESLVANDCIHEESSIRDEFDATNRQIDELKEKLEKVKAEKEEVKTCLMKSESVIETSQLKMREAERKLEELQRELENAYKSKQLLENELTSMQSEAKSITAKVHLLEAEVDKEKAISVEIEKRYKELEEELERKKQEEKFGSITSYSEMKLKQEDLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDTTCIPELSVTPSFIARDSAVTLKSHSNGTYSTERDSDSSSKNEESSLPSSSTNLPKHDSEKSINGFVNIFSQTESGLQLEI 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02251 678 MobiDBLite consensus disorder prediction 639 657 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 333 348 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 1 27 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 622 657 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 310 350 - -
Vimu10g02251 678 Pfam Filament-like plant protein, long coiled-coil 241 305 IPR008587 -
Vimu10g02251 678 Pfam Filament-like plant protein, long coiled-coil 414 590 IPR008587 -
Vimu10g02251 678 Pfam Filament-like plant protein, long coiled-coil 336 410 IPR008587 -
Vimu10g02251 678 Pfam Filament-like plant protein, long coiled-coil 124 222 IPR008587 -
Vimu10g02251 678 SUPERFAMILY Tropomyosin 425 590 - -
Vimu10g02251 678 Coils Coil 203 223 - -
Vimu10g02251 678 Coils Coil 243 263 - -
Vimu10g02251 678 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 10 672 - -
Vimu10g02251 678 Coils Coil 292 312 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 310 332 - -
Vimu10g02251 678 Coils Coil 420 545 - -
Vimu10g02251 678 Coils Coil 142 169 - -
Vimu10g02251 678 MobiDBLite consensus disorder prediction 1 16 - -
Vimu10g02251 678 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02251 Vimu-Chr10 32987087 32992062 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02251 - - gmx:100783676 854.358