Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02250 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGCCACTCCCTGGGTTTGAAGAAAGACCTTTTCCAACAATTGAGGCCTAAATTCTCTCAACTCTCATTCAACCCTCTTCCATCATCAACTTCTTTCTCTTCTTCACCTCGTACATTCACAACTCTTGCTCTCTTCAAATCAAAGACCAAGGCCCCTCCTGCCAAGATTTACGTTGTGTGTTCATTGATTCAGGTTGCAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCCATGCTTGGTTTTGCGGCATCATTGTTGGGTGAAGCAGTAACTGGGAAAGGAATTCTTTCACAATTGAATCTGGAAACTGGAATTCCCATTTATGAAGCAGAGCCCCTTCTTCTGTTTTTCATCCTTTTCACGCTGCTGGGAGCTATTGGAGGTTTAGGTGACCGTGGGAAATTTGTCGATGACGAACCCAACACCGGAGGTGTCATTCCTTCAGGAAAAGGCTTCAGAGAAGCACTTGGTCTCGGTTCAGGTCCTTTGTTTGGATTCACGAAAGCTAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGATTCGTTTTCTCTTTGATTGGAGAGATTATTACTGGGAAGGGAGCACTCGCTCAGCTCAACATCGAGACTGGAGTACCGATCAACGAAATCGAACCCCTTGTGTTGTTCAACGTTCTTTTCTTCTTCGTCGCAGCTTTGAATCCTGGAACTGGCAAATTCGTTACGGATGAGGAGGATGATTAG 825 0.4521 MAQTMLLMSSVSSSHSLGLKKDLFQQLRPKFSQLSFNPLPSSTSFSSSPRTFTTLALFKSKTKAPPAKIYVVCSLIQVAKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEAVTGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPNTGGVIPSGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEEDD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02250 274 Gene3D Chlorophyll a/b binding protein domain 82 141 - -
Vimu10g02250 274 Pfam Chlorophyll A-B binding protein 94 217 IPR022796 -
Vimu10g02250 274 Gene3D Chlorophyll a/b binding protein domain 142 245 - -
Vimu10g02250 274 FunFam Photosystem II 22 kDa protein, chloroplastic 49 142 - -
Vimu10g02250 274 SUPERFAMILY Chlorophyll a-b binding protein 85 253 - -
Vimu10g02250 274 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 79 136 - -
Vimu10g02250 274 FunFam Photosystem II 22 kDa protein, chloroplastic 143 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02250 K03542 - gmx:100807355 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02250 10 32977746 32979090 Vimu10g02250 10 32977746 32979090 ECH