Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02239 ATGGAGACGGAACCTTCAACTTATGCAGTAATGCATATAAGGGTTACTAGGTGGAAGATTGAGAAAACCAAAGTAAAGGTGGTTTTCCGGCTCCAATTCCATGCTACACATATTCCACAATCTGGATGGGATAAGCTGTTTATCTCTTTTATCCCTGCTGACACTGGGAAGGCTACATCAAAGACCACCAAAGCAAATGTGAGAAATGGAACTTGCAAGTGGGCAGATCCAATCTATGAAACTACAAGACTCCTCCAAGACATTAAAAGTAGACAATATGAAGAGAAGTTTTATAAATTTGTTGTGGGGATGGGTTCATCACGATCTAGCATCCTTGGTGAGGCCACCATCAATCTTGCTGATTTTGTTGATGCCTTGAAGCCAACAGCTGTTTCTTTGCCTCTTAATGGAACTGAACCTGGAGTCACACTACATGTCACAGTGCAGCTTCTCACTTCCAAAACTGGTTTCAGAGAATTTGAGCAGCAGAGGGAACTTAGAGAGAGGGGCCTACAGACAACCTCTGACCAAGGTACTCATGACGAATCTGCTGATAGCAAAGAGTCATCTCCTGACCAGAATGTCAATAATCATATAAATAAGTCTAGGATAAATGAAGAGTATGCCGATTCAGCTGCTGGCTTTGATGGCTCTTCTAGTACTTCTGAAAGCATATATACTGAGAAGCATGATATCTCTAGTGCACATGAAGTGGACAGTCTTAAAAGCACGGTCTCTGGTGATTTAAGTGGACTATCCCTCAGTCAAAGTACTCAACCAGACAAAGGGGAGGCACTTGATAATCAGTTTCCAGCACAGGGTAGTGATCGGGTTCATGGTTGGAGCATAGACTATTCAGCTGCCAATAGTTTGGCTGCTACTTCTGAAGATAGGAGCAGTAGTAGACTTATGGGAAATTTGGAAGTAGTTGAGTCATCTATTCTTGATCTAAAATTGAAGGTAAGTTCTTTGCAAAATCATGCTGATGAAATAGGTGTTGAAACACACAAGTTTTCTGAGCAACTTGCAACTGAGATTTCGTCTGGAGAAGAGTTAGTAAAGGAGGTTGCAGTACTAAAATCTGAATGTTCAAAGTTTAGAGATGAGTTTGAGCAGCTTAAAAATTCTAAATTGAGCTTACCATTCCCTCACAAAGATCCTATTGATACAGATCAGGATAAATTATTTCAAAATTTGCAGCATAAATGGATTAAGGGGCTTTTGCTTATGGAAGATAAGTTAAGAGGTATTCAGAAGGTGTCCATGGGATTTCCTGAAAGGGATTTTCGGTTCCTTAACTTGGAGTTAGAAGCACTGGCTGAAATTTTACAGAACCTCAAACAAGAATCTGGAGAGCCAATTTTTGGGGCCAAAATTGCCAACCAAAGGGAGAACAAGAAAATGAATTTGCATAAAAGTGAACAATTTTTAACGGATATTGGGTCTGATGCGGGTTTATTACAACCGGAAAGCATGAGTCAGTATCTTTCCATACCTGGCCTTGTGTCTCACGAGTTTGATTCTGTTGATCCTACCCTTGCCATGAAAGAGAAAATTTTTGAACTTTTAAGAGAGATAGATGAGTCCAAAACCGAAAGGGAAAGCCTTGTACGGAAAATGGATCAGATGGAATGCTACTATGAAGCTCTTATTCAGGAACTTGAGCAGAACCAAAGACAGATGATGGCTGAGTTGCAGAACCTTCGGAATGAACATTCTACTTGTCTGTACACAATTTCTGCTGGTAAGACCGAGATGGAGAGAATTCACCAGAATATGAATGAGCAGATGATGAAATTTGCTGAAGACAAACGCATTTTGGAAACTCTGAACAATGAGTTTGAAAGAAGGGCTATTTCTGCTGAAGCAGCCCTTAAAAGGGCCAGATTGAATTATTCTATTGCTGTTGGTCAATTGCAAAAAGATCTTGAAATTCTTTCTTGCCAAGTTCTTTCTATGCATGAGACAAATGAGAATCTCATAAAGCAGACCCTTTCTGATTCTTCAGTTCCAGACATTGATGATAGCCCAGAACAAGTGGTCTATCCTAAAATTTCAGAAGCTCATACATCCAATCGATTGCTGTGTCAAAATCACAGTTCTTCCTTACAAAGACAACATTTGGGTGAAGACATTTTACTTAACGATTTGAAAAGATCACTTCAGGTGCAAGAGGGGTTATACATGCAAGTTGAAGAAGAAATTAGCCAAATGCATTTTGCAAATATATACTCTGATGTATTTTCTAAGGCTTTGCAAGAAACATTGCTTGAAGCTAGTATTGACATTCAACTCATGAAAGAGAAAATTGTTCAACTCTCTCAGCAGCTGGTGCTTGCAAATGAATCAAATGAGTTATTGGTGTTGAGGTTGCAGAATGCTATGAATGATATCCTTTCACTAAATGAGTACAAGGAGATCTGCACAGCAAAGAGCAATGATATTGCTCTCCAGAACCAGATTTTGGAGGCAAATTTGAAAACTCTTGCTCATGAAAACAGTCTTCTTACTGAGAAAGTTGATGAGCTGGATGTTCTTCTGACAGAGTATAGAAGTTACAAAGGAAAGTATGTGGCATGCAGTACAGAAAACTCGGAATTGAAGAGTTTATTGAAAAAAGAGAGCCTAGAAAATAATCATCTTCATGATGAAATATCCATTTTGCAGGAAGAATTAAAGTCTACTAGAACTAAAATTGACGAGGAAGTTTCAATGAAGAATAATCTGCAGAGTAATGTCACCTTTTTGTCTAATAAGTTGCAGAAATCGCTGGCATTGTATGAAGAAAGACACAGCGAACTTTCTCTTTGCAGTAGATCTGCTTGTTTGGATTCAAAATCTGAAGACTTCGAGGGTCTTTTATTGCAGCTAGAAGAGCTACAACAGAGTGCATTTCATAGAATCCTTCAACTCACAGAAGAGAAGGAGATTTTACTGCATGATAAACAAAAGACTCAAGTATCTTTAAATACTGCTGAATCAAATGCTCTAGTCATGAAACAGAAGTTTGAGCATGATTTGCAAGAAATGTTACGTAGGATAACTGTGTCAGATGCTCTGTTGCAGAAACTTCAGTTAGATTTTGAGGTGATCATTAATAGAACTAGTGCTAGTTTGGAAGCTGAAGAGTTATACTCTCAGCAGCACAAAGAATTTTTGTCCGGTCTTGATCATTTGGAAGCTGAGTTACAACAACTTAATTCCAGAAATCAGGACCTTTCTCATGAAATAACAAAACTAGATGCTACATCTATCGAACTTGAAATGTGTAAGTTGACCTTAGCAACAATTGAAGAGGAAAAGAAAGATTTGGAGTCGTCTTTACAGGAAAAAACTGAAGAATCAGCCAAGATTTCATCTGAGCTTGATTTTTTGAAAAACAACTTGAATTCTCTGCATGATGAGTTGCACACTGAGAAAACTGTTAGAGAAAAGTTGGAGAAAACAGTTTCCAATCTTACAACTGAATTGAATGAGAAGCAAAGCCAGCTGCAGGGAACGAGAGATTTGGAGTTGTCTTTACGGGAGAAAACAGAAGAGTCAGCCACGATATCATCTGAGCTTGATTCTTTGAAGGTGAACTTGAATTCTCTGCATAATGAGTTGCATGCTGAGAAAGCTGTCCGTGAAAAGTTGGAGAAAACAATTTCAGATCTTAACACAGAATTGAATGAGAAGCAGAGTCAGCTGCAGGGAAAGAAAGATTTGGAGTCATCTTTACTGGAGAAAACAGAAGAATCCGCCAAGATCTCCTCCGAGCTAATTTTTTTGGGGGAAAATTTGCATTCTCTGCATAATGATTTGCGTGCTGAGAAAACTGTCAGAGAAAGATTGGAGAAGGCAGTTTCAGATCTTACCACAGAATTGAATGAGAAGCAATGCCAGCTTCAGGATTCTGATCTGAACAGAAAAGAACTTGTCTATCTCAAACGAATGGTGTCAGACTTAGAATTTGAAAATTCAAGAATCTCAGATCTTCTACAGAAATCTGAGAAATATCTTACAGATGCTTTAAAAGAATCTTCTTCTATTACATTTCTGGAAACTCTGTTATCTGAAATGCATGAATTTTGCATAGCTACAGACGTTGTTATGACTTTTACCAGAGCTCAGTTTGAGGATCATTTGGAAGAGCTTACTGAGAAACTTCATTCCACTTGCAGGCAACTTGATATGCTTCACACGAAGAATTTTGATGTAGAATCTGAATTGAATCGTTGTCTTTACAGAGAACTGACGTGCATTGAAGAAAATACAAGATTGTTGACGAGTCTTGACTTCCTGAAATCTGAGTTAGAGGTCTTGACTGCTCAGAATAGAGAACTAATTGATCAAAACAGTGGAATTGTGTCAGAGGTTAAGGATCACAAGAATAGGACAGAAGAGGTCAGTTATACTTATGTGCATGAAAGAGAGAATGTCCTTGAGGTTGCAAGGTTGGAGCAATTGCTGGAAAGTTGTCGTAGAGATGCTGAAGAACTCTTTTTGTCTAAGGAAGAAGCTGAACTCAAGTGTATAGTTCTCCAGGACAAATTGAACGAACTAGAAACTGCATGCACTTCATTAAAACAATCAGATGATGAACTGATAAGGCTTCAGAGCCAATGTAACGAGCTTACCAAGAGGCTTGCTGAACAGGTTTTGAAGACAGAGGAGTTTAAGAATTTGTCTATTCATCTGAAGGAACTGAAAGACAAAGCTGAGGCGGAGTGTCTTAATGCTCATGACAGGAGAGGACATGAAGCACCACCAGTTGCTATGCAGGAGTCCTTGAGAATTGCATTTATCAAGGAACAATATGAATCGAAGTTGCAAGAACTAAGACAGCAGTTGTCTTTGTCAAAAAAGCATAGCGAGGAAATGCTTTGGAAACTACAAGATGCAGTCGATGAAACTGAGAATAGAAAAATGTCTGAAGCTTCTCAAATAAAAATTAACGAAGAGCTGGGGATGAAGATCTTGGAATTGGAGGCTGAGTTACAGGCTGTACTTTCTGACAAACGTAATTTGTTAAATGCGTATGACCTGCTTAAGGCTGAAAAAGAGTGTTCCGCAATAAGCCTTGATTGTTGTAAGCAAGAAAAGCAAGAGCTTGAAGCTTCTCTTGTGAAATGCAATTTGGAGAAATCCAAAATCGAAGTAGAACTTACTTTGGCGAAGGAGCAGGTGGAGACTACGAGATCTCATGCAAATTCTCTAAACAAGGGCAATGGTACATTATCTTCTTCGATGAATCCTCAGCAAACATATAATCATGAGACAGAGAGTGCAAGTTTACTCATCAACATGCAGCCCGAGGATCCTCTTGCATTTAGCCTTATGAATGGAGGACAAACTCTTGGAAGTGAAAAGGACTTGCAACAAGAAGAAGTAATGAAGCATGTGGCATCAACCGAAAGTTTGAAATCTAGCATTGACCACTTGAGTAAGGAGCTGGAAAGGATGAAAAATGAGAATATGCTTCCTTCAGTAGATGGTCATAGTCATGATGAGCCAAGTTTTCCAGGTCTGCAAAGAGAACTGATTCAACTCCATGAGGTAAAAGGATCTTCTTCATTGACAGTTATGAACCATTCCTCTGCCAATCAAGAATTAGGAAACATATTCCCTGTATTCGATAAATTCTCAGTCAGCGGTAATGCATTAGAAAGAGTGCTTGCTTTAGAGATAGAGCTTGCTGAAGCATTGCGGACCAAGAAGTCAAACATGCAATTTCAGAGTTCTTTCTTGAAACATCATGGTGATGAGGAAGCAGTATTCCGAAGCTTCAGGGATATCAATGAGCTAATTAAAGATATGTTAGAACTAAAGGCAAGACATTCTGCTGTGGAGACAGAACTGAAAGAGATGCATGACCGTTACTCTCAATTAAGTCTTCAATTTGCAGAGGTTGAAGGTGAGAGACAAAAACTCATGATGACTATAAAGAATACTCGTGCATCTAAGAAGGCTTCAAGTTAA 5961 0.3884 METEPSTYAVMHIRVTRWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADTGKATSKTTKANVRNGTCKWADPIYETTRLLQDIKSRQYEEKFYKFVVGMGSSRSSILGEATINLADFVDALKPTAVSLPLNGTEPGVTLHVTVQLLTSKTGFREFEQQRELRERGLQTTSDQGTHDESADSKESSPDQNVNNHINKSRINEEYADSAAGFDGSSSTSESIYTEKHDISSAHEVDSLKSTVSGDLSGLSLSQSTQPDKGEALDNQFPAQGSDRVHGWSIDYSAANSLAATSEDRSSSRLMGNLEVVESSILDLKLKVSSLQNHADEIGVETHKFSEQLATEISSGEELVKEVAVLKSECSKFRDEFEQLKNSKLSLPFPHKDPIDTDQDKLFQNLQHKWIKGLLLMEDKLRGIQKVSMGFPERDFRFLNLELEALAEILQNLKQESGEPIFGAKIANQRENKKMNLHKSEQFLTDIGSDAGLLQPESMSQYLSIPGLVSHEFDSVDPTLAMKEKIFELLREIDESKTERESLVRKMDQMECYYEALIQELEQNQRQMMAELQNLRNEHSTCLYTISAGKTEMERIHQNMNEQMMKFAEDKRILETLNNEFERRAISAEAALKRARLNYSIAVGQLQKDLEILSCQVLSMHETNENLIKQTLSDSSVPDIDDSPEQVVYPKISEAHTSNRLLCQNHSSSLQRQHLGEDILLNDLKRSLQVQEGLYMQVEEEISQMHFANIYSDVFSKALQETLLEASIDIQLMKEKIVQLSQQLVLANESNELLVLRLQNAMNDILSLNEYKEICTAKSNDIALQNQILEANLKTLAHENSLLTEKVDELDVLLTEYRSYKGKYVACSTENSELKSLLKKESLENNHLHDEISILQEELKSTRTKIDEEVSMKNNLQSNVTFLSNKLQKSLALYEERHSELSLCSRSACLDSKSEDFEGLLLQLEELQQSAFHRILQLTEEKEILLHDKQKTQVSLNTAESNALVMKQKFEHDLQEMLRRITVSDALLQKLQLDFEVIINRTSASLEAEELYSQQHKEFLSGLDHLEAELQQLNSRNQDLSHEITKLDATSIELEMCKLTLATIEEEKKDLESSLQEKTEESAKISSELDFLKNNLNSLHDELHTEKTVREKLEKTVSNLTTELNEKQSQLQGTRDLELSLREKTEESATISSELDSLKVNLNSLHNELHAEKAVREKLEKTISDLNTELNEKQSQLQGKKDLESSLLEKTEESAKISSELIFLGENLHSLHNDLRAEKTVRERLEKAVSDLTTELNEKQCQLQDSDLNRKELVYLKRMVSDLEFENSRISDLLQKSEKYLTDALKESSSITFLETLLSEMHEFCIATDVVMTFTRAQFEDHLEELTEKLHSTCRQLDMLHTKNFDVESELNRCLYRELTCIEENTRLLTSLDFLKSELEVLTAQNRELIDQNSGIVSEVKDHKNRTEEVSYTYVHERENVLEVARLEQLLESCRRDAEELFLSKEEAELKCIVLQDKLNELETACTSLKQSDDELIRLQSQCNELTKRLAEQVLKTEEFKNLSIHLKELKDKAEAECLNAHDRRGHEAPPVAMQESLRIAFIKEQYESKLQELRQQLSLSKKHSEEMLWKLQDAVDETENRKMSEASQIKINEELGMKILELEAELQAVLSDKRNLLNAYDLLKAEKECSAISLDCCKQEKQELEASLVKCNLEKSKIEVELTLAKEQVETTRSHANSLNKGNGTLSSSMNPQQTYNHETESASLLINMQPEDPLAFSLMNGGQTLGSEKDLQQEEVMKHVASTESLKSSIDHLSKELERMKNENMLPSVDGHSHDEPSFPGLQRELIQLHEVKGSSSLTVMNHSSANQELGNIFPVFDKFSVSGNALERVLALEIELAEALRTKKSNMQFQSSFLKHHGDEEAVFRSFRDINELIKDMLELKARHSAVETELKEMHDRYSQLSLQFAEVEGERQKLMMTIKNTRASKKASS 1986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02239 1986 Coils Coil 1049 1083 - -
Vimu10g02239 1986 ProSiteProfiles C2 NT-type domain profile. 17 152 IPR019448 -
Vimu10g02239 1986 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 14 976 - -
Vimu10g02239 1986 Coils Coil 1926 1953 - -
Vimu10g02239 1986 Coils Coil 1188 1236 - -
Vimu10g02239 1986 Coils Coil 1087 1135 - -
Vimu10g02239 1986 Coils Coil 1646 1673 - -
Vimu10g02239 1986 Coils Coil 1268 1295 - -
Vimu10g02239 1986 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 22 151 IPR019448 -
Vimu10g02239 1986 Coils Coil 819 839 - -
Vimu10g02239 1986 Coils Coil 429 449 - -
Vimu10g02239 1986 Coils Coil 611 631 - -
Vimu10g02239 1986 MobiDBLite consensus disorder prediction 1725 1748 - -
Vimu10g02239 1986 Coils Coil 1798 1818 - -
Vimu10g02239 1986 Coils Coil 756 783 - -
Vimu10g02239 1986 Coils Coil 519 571 - -
Vimu10g02239 1986 MobiDBLite consensus disorder prediction 166 197 - -
Vimu10g02239 1986 Coils Coil 1484 1518 - -
Vimu10g02239 1986 MobiDBLite consensus disorder prediction 251 273 - -
Vimu10g02239 1986 Coils Coil 1369 1389 - -
Vimu10g02239 1986 Coils Coil 1425 1445 - -
Vimu10g02239 1986 MobiDBLite consensus disorder prediction 166 188 - -
Vimu10g02239 1986 Coils Coil 1597 1635 - -
Vimu10g02239 1986 Coils Coil 871 898 - -
Vimu10g02239 1986 Coils Coil 943 963 - -
Vimu10g02239 1986 Coils Coil 1522 1549 - -
Vimu10g02239 1986 Coils Coil 1143 1170 - -
Vimu10g02239 1986 Coils Coil 1688 1715 - -
Vimu10g02239 1986 Coils Coil 714 734 - -
Vimu10g02239 1986 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02239 Vimu-Chr10 32780822 32792450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02239 - - gmx:102663421 2894.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02239 10 32780822 32792450 Vimu10g02239 10 32780822 32792450 ECH