Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02238 ATGATTCACAGTGTTCTAAAAACAAGTAGATTCTTCAATCCACGTACAGAAGCCCTTGGTTTGACCAGTGTAATTGTTGGTTTTGTTTGTCATTTAGCATTTAGTTCAATGAAACAAATCAATTGTATAGGGGATTCTAGTTTGTGTACTGTTGCCCCCTGTAAGGAACCCTCCATTACAGATTCCTTATCAGTCAGTGGAAACGGTACTACTTCATCTATGAGTGTACAATCCACCCCTGAAATAGAAAAGAAGTTCGTTCATCATGTATATGATGCTATTGCTCCGCATTTCAGTGCCACTCGGTTTGCCAAATGGCCGAAGGTTGCATCATTTTTGTCATCTTTGCCTTTGGGGTCTCTTGTCCTTGATGCAGGATGTGGGAATGGGAAATACCTAGGTTTGAATCAGGATTGTTTTTTCATAGGATGTGATATAAGTCCTTCCTTGATTAAAATCTGCTCGGATAGAGGGCATGAAGTTTTGGTGGCAGATGCTGTGAATCTTCCTTACAGAACTGGTTTTGGTGATGCGGCTATATCAATAGCAGTGTTACATCACTTAAGCACTGAAAGTAGAAGGAGAAAAGCAATAGAAGAATTGGTCAGAGTTGTTAAAAAGGGTGGCCATGTTCTGATTACAGTTTGGGCTGTAGAGCAAGAGGATACAAATCTAATTACCAAATGGACTCCACTGACTGAGAAGTATGTTGAAGAGTGGGTAGGACCAGGGAGTCCTCGTGCTCGGACACCCTCACCCTTGCCATTAGAAAGCATTCCTGAGAGTGAGGAGAGTAGCACCGGTGAATACATAAAAGTTTGCAGTGAGTCAAATGTAAGTAAAGATTTGGAGGCAGAAAAACATATAAAGAACCAACAGGAATACTTTGTTCCCTGGCATTTACCTTATCATCGTGCTGAAATCAGTGGTGCTTCTTCTCATGCTCTTGCTGCTGGTCTGGCAACTAAAGATGACAAAAAGGGTGCTGTGGTGTATAATCGATACTATCATGTTTTTAGTGAAGGAGAACTTGAAAGTTTGACAGCTGGAATAATCAATGCTAGAATTGTTGATCAGTTTTTTGATAAATCCAATTGGTGTATTATTCTGGAGAAAACAGCATAA 1125 0.4036 MIHSVLKTSRFFNPRTEALGLTSVIVGFVCHLAFSSMKQINCIGDSSLCTVAPCKEPSITDSLSVSGNGTTSSMSVQSTPEIEKKFVHHVYDAIAPHFSATRFAKWPKVASFLSSLPLGSLVLDAGCGNGKYLGLNQDCFFIGCDISPSLIKICSDRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTESRRRKAIEELVRVVKKGGHVLITVWAVEQEDTNLITKWTPLTEKYVEEWVGPGSPRARTPSPLPLESIPESEESSTGEYIKVCSESNVSKDLEAEKHIKNQQEYFVPWHLPYHRAEISGASSHALAAGLATKDDKKGAVVYNRYYHVFSEGELESLTAGIINARIVDQFFDKSNWCIILEKTA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02238 374 Pfam Methyltransferase domain 123 213 IPR013216 GO:0008168
Vimu10g02238 374 CDD AdoMet_MTases 122 218 - -
Vimu10g02238 374 PANTHER UNCHARACTERIZED 74 372 - -
Vimu10g02238 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 239 IPR029063 -
Vimu10g02238 374 MobiDBLite consensus disorder prediction 242 264 - -
Vimu10g02238 374 Gene3D Vaccinia Virus protein VP39 98 374 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02238 K10770 - gmx:100784028 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02238 10 32758226 32759923 Vimu10g02238 10 32758226 32759923 ECH