Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02226 ATGAAGACTCGCACCTCTATCAAAATCTCTGCATCGTGGATTCCCATCTTCTCTGTCTTTTCCTTCATTCTTGGTATGCTCATCACAAGCAGGATGTGGGACCCACCTGAATCAAACGGGATGCTTATTGCGCAGCATCAGCAGGACCAACAGCTGCAAATGCAGCCCAAGGATGCAGTGAGCGAGTTACAGAAGACCCATGAAGCCATCCAAGCTTTAGACAAACAAGTTTCCATGCTTCAGATGGAGCTAGCAGCAGCTAGGAGTTCTCGTGAAAATGGGATCTCTGATTCGAATACTTCAACCACCACTTCCGAGGAAGGTTCTGCAAGAAAGAAGGCATTTATAGTGATTGGCATAAACACGGCTTTCAGTAGCAGGAAGAGGCGTGATTCAGTAAGAGAGACTTGGATGCCTCAAGGTGAACAACTTCTTCAGTTGGAACGGGAGAAGGGAATTGTTATCAGGTTCATGATTGGCCACAGTGCAACTTCCAACAGCATACTAGATCGAGCTATTGATTCAGAAGAAGCTTTGCACAAAGACTTTCTTCGCCTAGAACATGTTGAAGGGTATCACGAGCTGTCAGCAAAAACAAAGATTTTCTTTTCTACCGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAGGTTGATGATGATGTCCATGTTAATTTAGGTGTCCTGGCAACAACCCTTGCTCGTCACCGATCAAAACCCAGGGTCTACATTGGGTGTATGAAATCAGGGCCTGTCCTTTCCAGAAAGGATGTCAAATACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAATAAATACTTTCGACATGCAACTGGGCAGATATATGCAATCTCTAAAGATCTGGCCACTTACATTTCCATCAACCAGCCTATTTTGCATAAGTATGCCAATGAAGATGTCTCGCTTGGTGCCTGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAAGCAGGTAACATATGTGTTGCCTCATTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTCCACTCAAAGTGTGGAGAGGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1152 0.4488 MKTRTSIKISASWIPIFSVFSFILGMLITSRMWDPPESNGMLIAQHQQDQQLQMQPKDAVSELQKTHEAIQALDKQVSMLQMELAAARSSRENGISDSNTSTTTSEEGSARKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEALHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02226 383 FunFam Hexosyltransferase 108 329 - -
Vimu10g02226 383 Pfam Galactosyltransferase 128 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu10g02226 383 Pfam Domain of unknown function (DUF4094) 10 90 IPR025298 -
Vimu10g02226 383 Coils Coil 63 90 - -
Vimu10g02226 383 MobiDBLite consensus disorder prediction 91 108 - -
Vimu10g02226 383 MobiDBLite consensus disorder prediction 88 108 - -
Vimu10g02226 383 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 74 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu10g02226 383 Gene3D - 104 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02226 Vimu-Chr10 32629659 32633454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02226 1 383 Glycosyltransferase AT1G77810 70.277 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02226 K20855 - gmx:100776715 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02226 10 32629659 32633454 Vimu10g02226 10 32629659 32633454 ECH
Vimu1g02282 1 33133185 33136307 Vimu10g02226 10 32629659 32633454 PCT