Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02212 ATGGTGGTTTGCGTCCTTGTTGCAATTGTTGGCTTATGTTATACGATCAGGTATACTAAATGTTTTTGGGTTTTACGTTCTGAGGCTTATGGATCTGTGAGTGCTACTGGTTCTGTAGTGGATTTCGAATTAGGGTTCATGATGGTACAATGGAGGGGTTCCTGGTTGCTCGTTCTTGCAACTTGCTCAAGGATCTGTGGTGGTGAAGCAAATGAGTTGTGCAATGCAGGAGACGTAATTGCTCATGGTGGTCTATGTCAATGGGTGGTGGTATTCGCGATTTGGGGCTTGCGATATAGGTTGAATAGGTCAATGGTGGTCGATGGCATGATTCGGTGGCAACGTCGTAGTGATTTGGTGGCTAAGAGGGTGCCAGTGAGTTTACATTGTAAATGCGTTGATCACGCAACCTCCATCGACAGCACCAGAAAAATGCGCCAAGAAGTTGTACAGGAGGGCAGGAGCAAAACCCCAGAAGCGGAGAGAGATATTTACAGGGTAAAAGCAGGGAGCCGAAGAGTTACGCCGAGCGAGGAGGAATCGGAAGTAAGTAGCAGGACGGTGGAGAAGCGGTTGCCCAGCGGTGACGTCTACATGGGGAGCTTCTCGGGCAACGCACCTAGCGGATCGGGGAAGTATCTGTGGAGAGACGGGTGTATGTACGAGGGTGAGTGGAAGAAAGGGAAGGCGTGCGGGAAGGGGAAGTTTTCCTGGCCTTCGGGAGCCACCTACGAGGGTGAATTCAAATCGGGTCGGATGGAGGGGTTTGGGACCTTTACCGGATCCGAGGGCGAGACGTACTGCGGGTCGTGGAGTTCTGACCGGAAGCAAGGGTACGGGCAGAAGCGTTATGCCAACGGGGACTTCTACGAGGGGTTGTGGAAGCGGAACGTGCAGGAGGGGGAGGGGAGGTACGTGTGGGTAAACGGTAACGAGTACTACGGGGAGTGGAGGAACGGGGTGATTTGTGGGCGGGGTACGCTGATTTGGGCCAATGGGAATCGGTACGAGGGGCAGTGGGAGAACGGGGTTCCCAAGGGTCAAGGGGTTTTCACTTGGCCCGATGGGAGCTGCTATGTTGGGTGCTGGAACAAAGACCTTAAGGTGCACCAGCTTGATGGAACCTTTTACCCCGGGAGTGCTGATAATCTCACTGTCACTATGAGGAAGAGGTCTTCCGTTGACAGTTCCAGAGCAAGTGGGGTCAAGAGTTTTCCCCGGATTTGCATCTGGGAATCCGAGGGTGACGCGGGGGATATAACCTGTGATATCATCGATAATGTGTCCTTGTTGTATCGGGATGGGAGAGAATCCGGGTCGGATCGGGGGCTTGTTAAACCGTTTCTACGGAATCCTTGTTGTTTTTCCGGTGAGGTAAAGAGACCTGGCCAGACTATATCAAAGGGGCATAAGAATTATGATCTTATGCTTAAACTGCAACTGGGTATAAGGTACTCTGTTGGTAAGGAAGCTTCCATTTCGCGAGGGCTCAAATCGACCGATTTTGAACCTAAGGAGAAGTTCTGGACTAGGTTTCCCTCTGAAGGATCTAAGATTACGCCACCGCACCAATCTGCGGAGTTCCGCTGGAAAGACTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCTCTTTCAAGTGGACCCTGCGGATTACATGTTGGCCATATGTGGGAATGATGCCCTCAGGGAGCTTTCTTCTCCGGGGAAAAGTGGAAGCTTTTTCTACTTGACACAGGATGACAGGTTTATGATAAAGACGGTGAAGAAATCCGAAGTCAAGGTCCTTCTTCGGATGCTTCGAAGCTATTACCAACATGTTTCTAAATATGAGTACTCACTTGTTACAAAGTTCTACGGAGTGCACTGTGTCAAGCCAATTGGAGGCCAAAAGTTCTATGTGCCTGAGTGCCTAATTGTTGTTGTTGAAATCCAGACACGCTTTATAGTGATGGGCAATCTGTTCTGCTCGGAATATCCAATCCACAGACGATTTGACTTGAAAGGATCTTCCCATGGCCGCACAATAGATAAAACCAAGGAGGAAATTGACGAAACCACCACCCTTAAGGACCTCGATCTCAATTTTGTGTTTCGTCTACAAAAAAATTGGTTCCAGGATCTAATCGAACAAATTGAGCGGGACTGTGAGTTCTTGGAAGCTGAGGGAATTATGGATTACAGTCTCTTAGTGGGTCTTCATTTTCGTGATGATAATACATATGAAAAAATGGGATTGTCACCGTTCCTTTTGCGCACAGGAAAGTGGGAGGATTCTTATCAGAGTGAAAAGTTCATGCGTGGTTATCGCTTTCTCGAAGCAGAGCTGCAAGATAGGGATTGGGTTAAATCTGGTCGGAGATCATTGATTAGATTAGGAGCAAATATGCCAGTGAGAGCAGAGCGTATGGCTCGGAGGAGTGATTTTGATCAATACACCCCTTGTTGCAGTGGTGAAACCTACGATGTTGTTTTATATTTTGGGATTATTGACATTCTGCAAGGTTATGATATCAGCAAGAAACTGGAGCATGCTTACAAGTCGTTACAGGTTGACCCGTCATCAATCTCAGCCGTTGATCCAAAGCTCTACTCAAAAAGGTTCCGGGATTTTATGACTGTTGGTGGAGTGGGAGAGCTTGCGGTTGGCGGTGGACCTGTTTCTACGGCCGTGACCAAGAGAGATCACCTGAATGCAGGTTGTTTTCATGGCTGA 2715 0.4858 MVVCVLVAIVGLCYTIRYTKCFWVLRSEAYGSVSATGSVVDFELGFMMVQWRGSWLLVLATCSRICGGEANELCNAGDVIAHGGLCQWVVVFAIWGLRYRLNRSMVVDGMIRWQRRSDLVAKRVPVSLHCKCVDHATSIDSTRKMRQEVVQEGRSKTPEAERDIYRVKAGSRRVTPSEEESEVSSRTVEKRLPSGDVYMGSFSGNAPSGSGKYLWRDGCMYEGEWKKGKACGKGKFSWPSGATYEGEFKSGRMEGFGTFTGSEGETYCGSWSSDRKQGYGQKRYANGDFYEGLWKRNVQEGEGRYVWVNGNEYYGEWRNGVICGRGTLIWANGNRYEGQWENGVPKGQGVFTWPDGSCYVGCWNKDLKVHQLDGTFYPGSADNLTVTMRKRSSVDSSRASGVKSFPRICIWESEGDAGDITCDIIDNVSLLYRDGRESGSDRGLVKPFLRNPCCFSGEVKRPGQTISKGHKNYDLMLKLQLGIRYSVGKEASISRGLKSTDFEPKEKFWTRFPSEGSKITPPHQSAEFRWKDYCPMVFRQLRKLFQVDPADYMLAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSKYEYSLVTKFYGVHCVKPIGGQKFYVPECLIVVVEIQTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTIDKTKEEIDETTTLKDLDLNFVFRLQKNWFQDLIEQIERDCEFLEAEGIMDYSLLVGLHFRDDNTYEKMGLSPFLLRTGKWEDSYQSEKFMRGYRFLEAELQDRDWVKSGRRSLIRLGANMPVRAERMARRSDFDQYTPCCSGETYDVVLYFGIIDILQGYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFMTVGGVGELAVGGGPVSTAVTKRDHLNAGCFHG 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02212 904 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 557 873 IPR002498 GO:0016307|GO:0046488
Vimu10g02212 904 SUPERFAMILY SAICAR synthase-like 468 873 - -
Vimu10g02212 904 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 458 653 IPR027484 -
Vimu10g02212 904 Gene3D - 274 319 - -
Vimu10g02212 904 Gene3D - 188 227 - -
Vimu10g02212 904 Gene3D - 228 273 - -
Vimu10g02212 904 Gene3D - 320 377 - -
Vimu10g02212 904 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 193 320 - -
Vimu10g02212 904 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 207 873 IPR023610 -
Vimu10g02212 904 Coils Coil 702 722 - -
Vimu10g02212 904 Pfam MORN repeat 290 311 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 267 288 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 198 220 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 244 264 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 221 242 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 313 335 IPR003409 -
Vimu10g02212 904 Pfam MORN repeat 336 357 IPR003409 -
Vimu10g02212 904 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 467 876 IPR002498 GO:0016307|GO:0046488
Vimu10g02212 904 SMART morn 242 263 IPR003409 -
Vimu10g02212 904 SMART morn 196 217 IPR003409 -
Vimu10g02212 904 SMART morn 311 332 IPR003409 -
Vimu10g02212 904 SMART morn 219 240 IPR003409 -
Vimu10g02212 904 SMART morn 334 355 IPR003409 -
Vimu10g02212 904 SMART morn 265 286 IPR003409 -
Vimu10g02212 904 SMART morn 288 309 IPR003409 -
Vimu10g02212 904 Gene3D - 654 874 - -
Vimu10g02212 904 SMART PIPK_2 498 877 IPR002498 GO:0016307|GO:0046488
Vimu10g02212 904 FunFam Phosphatidylinositol 4-phosphate 5-kinase 228 272 - -
Vimu10g02212 904 FunFam Phosphatidylinositol 4-phosphate 5-kinase 320 389 - -
Vimu10g02212 904 CDD PIPKc_AtPIP5K_like 472 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02212 Vimu-Chr10 32470020 32476020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02212 166 873 Acyl Lipid Metabolism Gene Families AT1G77740 72.006 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02212 K00889 - gmx:100813118 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02212 10 32470020 32476020 Vimu10g02212 10 32470020 32476020 ECH