Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02197 ATGGAGAGAATGAATAGTGGGGGTTCGTCAATCAGAAGACGTTCATTAAGCATATCAAGTCACGTAAGTTATCATATGGAAAATGATGGTGAGAATGAGAGTGTTTCAGAGGCTGGAGACATTGGAGATAGAGCTCTTGGAAGCAGGAGGTTTAGTGAGAGCAATAGTTTCCGTTTGTCCTTCAATAACAGGTCAGAAAAAGAAGCTGTTGTTTCCATTCCAGATGAACACAAATCGCATTCCAATTCCTCTGTTGGGCCTTTGCCTCCTGTCTTCACATCCACTGATGGAATCGTAGGTTTTGAAGACACACAACATGACCCTCCTAAAGGTTTGCCAGAGTTGCTGGACTATACTTCGTGTTTGGTTCATTTGGCGGTTTTTGGAATTCTTGGGGTAATATCTCCTAAACTTTTTCTTGACGTGTTAGATATGGCTAACTTGTTGGTGCAGAATGGCATTGTTTCAATTCAGAATTCTATTGCCGATTCAGAGAGGATATGGCAAATTTCAGCTGTCTTGACGAGATATTTACTGCAGAAGTTATTTGGCCCTGGGGTTGCCCATGTGACAAGCGACCAAACCATTCTTTATGTTGATCTTCCTTCTAATATGATTGGTTCGTTTCTTATGGGTTGGTTTGGTGTGGTATTCAAAGGAGACATATCTCAAGTGTCAGAGCATCTAGCTATAGCAATAACAACTGGTTACTTAGGAAGCCTTACAACCTTCAGTGGTTGGAATCAAAAAATGCTTGAACTCAGTGTTTCCGGGCATTGGCTCTTCGCTTCACTTGGCTTTCTATTAGGTTTATTTCTCGTTGCCTATTCCATCCAGTTTGGGATTGAAACTGCCAAGGGTTTTAGGTGGCTCCTCCACCGACTGGGTATTAGTTCGGGAAAAGATGTTAATAAGATAAACTGCAGAGTAGACAGCTACCATCGTCAGTTGATAGTTATGGTGATGTTCATGGTTATATTAGGCATATTGTGGGGTGTAAGTGGTGCATTAGTAAAGGCTGAGTTCAAGCACGGTGGTAATTCTGCACACTTATGGTTTGCTTGCATGGTTGGACCCATGGGTGTGTGGATTAGATGGTTCTTAGCAAGGTTAAACGGGCGTGGATTGGGAAAGGAAGGGTTGTTTAAATGGATTCCATTCGGGACTTTAATTGCCAATGTATCAGCAGCTTGTATTATGGCTGCACTTGCCAGTGTGAAGAACGCAGTGAACACCAGAGATTGTGATACTGTTGTAGCAGGAATACAGTTTGGCCTAATGGGGTGCTTGAGCACTGTCTCTACTTTTGCTGCTGAGTTCAATGCAATGAGAGAAAGCAGTCATCCTTGGAGAGCCTATGCCTATGCCGTTATTACAGTTTGTGTTTCGTTTTCCTTGGGAATACTAATATACTGCATCCCTGTCTGGACAAAGGGGTTTGACATTGACACGTAG 1455 0.4268 MERMNSGGSSIRRRSLSISSHVSYHMENDGENESVSEAGDIGDRALGSRRFSESNSFRLSFNNRSEKEAVVSIPDEHKSHSNSSVGPLPPVFTSTDGIVGFEDTQHDPPKGLPELLDYTSCLVHLAVFGILGVISPKLFLDVLDMANLLVQNGIVSIQNSIADSERIWQISAVLTRYLLQKLFGPGVAHVTSDQTILYVDLPSNMIGSFLMGWFGVVFKGDISQVSEHLAIAITTGYLGSLTTFSGWNQKMLELSVSGHWLFASLGFLLGLFLVAYSIQFGIETAKGFRWLLHRLGISSGKDVNKINCRVDSYHRQLIVMVMFMVILGILWGVSGALVKAEFKHGGNSAHLWFACMVGPMGVWIRWFLARLNGRGLGKEGLFKWIPFGTLIANVSAACIMAALASVKNAVNTRDCDTVVAGIQFGLMGCLSTVSTFAAEFNAMRESSHPWRAYAYAVITVCVSFSLGILIYCIPVWTKGFDIDT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02197 484 PANTHER FLUORIDE EXPORT PROTEIN 1-RELATED 107 479 IPR003691 GO:0016020
Vimu10g02197 484 Pfam CrcB-like protein, Camphor Resistance (CrcB) 173 273 IPR003691 GO:0016020
Vimu10g02197 484 Pfam CrcB-like protein, Camphor Resistance (CrcB) 353 469 IPR003691 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02197 Vimu-Chr10 32267836 32270006 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02197 K06199 - gmx:100815204 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02197 10 32267836 32270006 Vimu10g02197 10 32267836 32270006 ECH