Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02189 ATGGAAGCACTTAACAACCTGAAAGATGGAATCATAAACCTTGGACGAGGCTTTCCCAACTTTGATGGTCCAGAGTTTATAAAGGAAGCAGCAATTCAAGCAATAAGGGATGGGAAAAATCAATATGGAAGTTCTGGAGTTCCAGACTTGAACATTGCTATTGCTGATAGATTTAGGAAAGATACTGGATTAGTGATAGACCCTGATAATGAAGTTACTGTTATTCTCTTTTCTCCTTTATATGATTATTATGAAGGTAATTTAGCCATGGCTGGTGCAAAAATAGTAAGCATCCCTCTGCAACCTCCAGATTTTGCTATCTCCATTGAAAAATTGAAGTCCATTGTGTCAAGGAGTACACGTGCCATTGTTATAAATACTCCTCACAACCCTACGGGAAAGATTTTCTCTCTGCAGGAGCTCAATGCCATTGCATCCCTTTGCATTGAGAAGGATGTTCTAGTATTTGCTGATGAAGTTTATCATAAGTTGACATTTGATTTGGAACACATTTCAATAGCTTCTTTGCCTGGAATGTTTGAAAGGACAGTGACAATGAACTCATTGGCAAAGACATTTAACATAACAGGATGGAAGATTGGTTGGGCCATAGCACCATCACACCTGACATGGGGGCTTCGACAGGCACATTCTTTCATCACTTTCTCAAACGCCACTCCTTTGCAGTGTGCAGCTGCAGTAGCTCTTAGGGCACCAGAGTCTTATTATGTGGAGCTGAAGAGGGATTATAGGGCAAAAAGGGATATTTTGGTTGAAGGATTAAAGGCAGTTGGCTTTAAGGTATTCCCACCCGATGGAACATTCTTTGTTTTAGCAGATCATACCCCTTTTGGGTTGGAAAATGATGTTGCATTTTGTGAATATATGCTTAAGGAGGTGGGGGTGCTGGCAATTCCTTGCAGTGTGTTTTGCTTGAATCCCGAAGAGGGAAAGAACCTAGTCAGATTTGTTTTCTGCAAAGATGATGAAACTCTTAGGGTCGCGGTTGAGAGGATGAAGGAGAAGCTTAGAAAATGA 1038 0.4085 MEALNNLKDGIINLGRGFPNFDGPEFIKEAAIQAIRDGKNQYGSSGVPDLNIAIADRFRKDTGLVIDPDNEVTVILFSPLYDYYEGNLAMAGAKIVSIPLQPPDFAISIEKLKSIVSRSTRAIVINTPHNPTGKIFSLQELNAIASLCIEKDVLVFADEVYHKLTFDLEHISIASLPGMFERTVTMNSLAKTFNITGWKIGWAIAPSHLTWGLRQAHSFITFSNATPLQCAAAVALRAPESYYVELKRDYRAKRDILVEGLKAVGFKVFPPDGTFFVLADHTPFGLENDVAFCEYMLKEVGVLAIPCSVFCLNPEEGKNLVRFVFCKDDETLRVAVERMKEKLRK 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02189 345 Gene3D Aspartate Aminotransferase, domain 1 5 339 IPR015422 GO:0003824
Vimu10g02189 345 PANTHER FI04487P 8 74 - -
Vimu10g02189 345 Pfam Aminotransferase class I and II 73 338 IPR004839 GO:0009058|GO:0030170
Vimu10g02189 345 SUPERFAMILY PLP-dependent transferases 9 344 IPR015424 -
Vimu10g02189 345 Gene3D - 41 238 IPR015421 GO:0003824
Vimu10g02189 345 CDD AAT_like 12 341 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu10g02189 Vimu-Chr10 32174083 32175186 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02189 K23977 - gmx:100818968 536.184