Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02184 ATGGATACTGTTATAGTGGATAAATTCCTCACAGCATTGGCATCTGTGTTTCCTCTCTGCTATAGCCTCTCCACCATTTCGTCTCCCTTCATGGGTTTCTCCAAAGAAAACCTTCTTGCGCGGTTGAAGGAGCTTCAGATTCCATTTTCCCAATACGAACATCCAGTTGTGCTGACCGTTGACGCTCAGGCTCAGTATGTTGGACATTTGGGGGGTGGGCTCAGTAAGAACTTATTTCTCAAGGATAAGAAAAGCAGACTGTATGTTGTTTCTGCTTTAGCTGCTACCAAAGTAGATCTTAAAGCAGTATTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAGGAGGCTCTAGGTGAAGTACTTCAGGTACCCCTGGGTTGTGTCACTCCGTTTGCACTAGTGAATGAATCAGCACGAGATGTTTCATTGCTATTGGATCAAGGTTTCAAAACTCAGGAGCACTGCTTCTTCCATCCACTGTCGAACGACATGTCTATCTCTATAAAAGCATGCGATCTTGACAAGTTTCTTAAATCAATTGGAAGAAATCCCTCATATGTTGATTTGGAGGCCAATCCTCCAGTGGGGAAAGATCAACCCCCTGATCTAGCTGCTCTAGTTCCATCCGGTTCAGTAGTTTTACCCGATCAACCACAAAAGAAGTCTTCACAGATTCCCAAGGATGCAAATCATGTTTCTGTTGGTAATGGAACCAGTGCAGTTTCAGCCAAAGTTGTCAAGTCCTCTGATGGGAAAAGTACAAAGGTACCACAAACACCGGTAAAAAATGTTAATTCATCAGGCTACGTTGCAGATGTTGGTCAATTCGTTGAAGAGATATTGCAAAAAACGTCACAGTTATTGCTTTCGGAGGTCAAGGAAGAGAATATAAAGTTACACGGGGAGCAGCTGGGTACGGTGGTATCTGACAAATTACAGAAAAACCTTACATCAGAGTTTAAGAACCTTGCTGAAATCAGACCCTCCATGTTATATGCAAAAGTATGCCTCTTATCACTCAATTCTTTATTACAGATGATATTCAAGAACACAGCATATACAGAAGGGTTCCATGCTGGTACTCATTATCGGCCCCCGCTCTTGTGA 1125 0.432 MDTVIVDKFLTALASVFPLCYSLSTISSPFMGFSKENLLARLKELQIPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYVVSALAATKVDLKAVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQGFKTQEHCFFHPLSNDMSISIKACDLDKFLKSIGRNPSYVDLEANPPVGKDQPPDLAALVPSGSVVLPDQPQKKSSQIPKDANHVSVGNGTSAVSAKVVKSSDGKSTKVPQTPVKNVNSSGYVADVGQFVEEILQKTSQLLLSEVKEENIKLHGEQLGTVVSDKLQKNLTSEFKNLAEIRPSMLYAKVCLLSLNSLLQMIFKNTAYTEGFHAGTHYRPPLL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02184 374 Pfam Aminoacyl-tRNA editing domain 54 182 IPR007214 GO:0002161
Vimu10g02184 374 SUPERFAMILY YbaK/ProRS associated domain 33 195 IPR036754 GO:0002161
Vimu10g02184 374 CDD PrdX_deacylase 35 193 - -
Vimu10g02184 374 Gene3D - 31 202 IPR036754 GO:0002161
Vimu10g02184 374 FunFam Putative prolyl-tRNA synthetase 30 199 - -
Vimu10g02184 374 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 31 369 IPR040285 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02184 - - gmx:100817904 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02184 10 32089479 32096424 Vimu10g02184 10 32089479 32096424 ECH