Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02182 ATGGCGAAGAACACCAACCTAAGCTCTGGAACCCCAAATCCTCTACTCTTGTTCTTATGTTTCACCACTCTCATGCTCCTTCGAACCGAGGCTGTATGGTTAACCATCCCAAGTAAGGGAACTAAGTGCATGTCTGAGGAAATCCAGGCACACGTCGTCGTTTTAGCAGATTACTACGTTGTTGCGGAGGATAGCAAGGGTCACCAACCTCAAACCGTTTCTGTCAAGGTGACATCCCCTTACGGAAATAATCTTCACCAGAATGAAAATGTTACCCATGGTCAGTTTGCATTTACAACTTCGGAGAGTGGGAACTATGTGGCGTGCTTTTGGGTGGATACCAAACATCAAGAAGGTGGAGTAGAGACCACAATCAGCCTTGAATGGAAAACTGGAATCGCTGCCAAAGATTGGGACTCCGTTGCAAGAAAGGAAAAGATAGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGGGCCGTGGAAGCCATCCGGGACAATCTAATTTATTTGAAGAATAGGGAAGAGGAGATGAGGGAAGTTAGTGAAACAACAAATGCTAGAGTGGCTTGGTTCAGTATCTTATCTCTTGGCATCTGCATCTGTGTTTCGGTGTTGCAGCTATTGTATCTGAAGCGCTTCTTTCGTAAGAAGAAGCTCATATAG 666 0.452 MAKNTNLSSGTPNPLLLFLCFTTLMLLRTEAVWLTIPSKGTKCMSEEIQAHVVVLADYYVVAEDSKGHQPQTVSVKVTSPYGNNLHQNENVTHGQFAFTTSESGNYVACFWVDTKHQEGGVETTISLEWKTGIAAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREEEMREVSETTNARVAWFSILSLGICICVSVLQLLYLKRFFRKKKLI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02182 221 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 16 218 IPR015720 -
Vimu10g02182 221 SMART EMP24_GP25L_2 31 216 IPR009038 -
Vimu10g02182 221 ProSiteProfiles GOLD domain profile. 41 156 IPR009038 -
Vimu10g02182 221 Coils Coil 147 174 - -
Vimu10g02182 221 Pfam emp24/gp25L/p24 family/GOLD 33 216 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02182 Vimu-Chr10 32069262 32070820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02182 K20352 - gmx:100500676 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02182 10 32069262 32070820 Vimu10g02182 10 32069262 32070820 ECH