Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02165 ATGGCCGAAGACACTGAGGGGATGAAGAAAGGAGAGACTATAGAGTCTCAGATTGAAATCGCTGAGGAGATGAAGAAAGGGGAGAATATAGAGTCTCAGATTGAAACCGCCATGCGCTCTCGCGTCTCTTACTTCAAGGAACAATCCGACTCTTTGACGTTCGAGGGTGTTCGTCGATTGCTTGAGAAAGACTTGGGATTGGAGGAGTATGCTCTGGATGTGCACAAGAGATTTATTAAGCAATGTTTGCTCAAGTGCTTAGAAGGGGTCGTTGATGATGATGCCCCAAGGATATCGGAGAAGGCAGGGGAAAATGGTGCAAGTACACAAGAGTCAGAAGAACCAAAAAAAAAGAGTGAATTAAAAGATGAGAAGGATGTTTGCCTTGAAGATGAGGAGAAAATGGAAGACTCTCCTGTGTTAGGTCTTCTTAAAGAACAAAAAAGGGCTAAACTTGAAACCAAAGATGATAAAGGCAATGGAAACAAAGTAGTTCTAAGTGAAGCCCTTATTATGAAAGCCGTTAGAAAAAGATCTTCGTACATTAAGGCTAATGCAGAGTCAATCACTATGGGTGGTCTTCGTCGACAATTGGAGGAAGATCTTAAACTTGATAAATTTACTCTTGATCCCTATAAGAAGTTTATAAGTCAACAGCTTGATGAGGTATTAGCTTCTTCTGTAGTTTCAGAACCCGCTAAGAATGCTAAGAAAATTGAAAAAAAAAAACCTGATACCAAAGTAACTAAAAAGGTCAGCAGTGAAGAAAACTCTGATTCTTCAGATAAGGAGACTGATGAGGACGGGAGTCAGGAAGATGAAGTTAAACCTCGGAAAAAGGTTGTTCCTAAAGGAAAGGTTAAGACTCCTGTCCAATCCAAAAAACGCAAAGGAGAGGAGACTGATCTGTCCAGTAAGAAAAGGATCAAACCTGCAAAAGCAGCCTCAGAAGAGATCAGTGATGCAGAGGATAATGGGAAAAACTCTGAAGATGATCAGTCCCATTCATCATCCGAGAAAGCTTCCAAGAAAAAAGAGGTTTCAGCCCCTGTGTATGGCAAACGTGTGGAGCACTTAAAGTCTGTTATTAAAGCATGTGGAATGGGTGTTCCTCCCTCAATTTACAAAAAGATCAAGCAAGTGCCTGAAAACAAACGGGAAGAACAACTAATCAAGGAGTTGGAGGAAATATTGTCTAGAGAAGGTTTATCTTCTAATCCATCTGAAAAGGATGGAAGGTATTGTAATTTCACTCAACCTCAGAGGAGATTGGGTTGGTCTAATCTTCCCTGTTTATTATGCCATAATGAAATCAAGGAAGTAAAAAGGAAGAAGGCTAGAGCCAAAGAACTTGAGGGTATTGATGTAAGTAATATTGTTTCAAGTTCTCGTAGAAGGTCAACAAGTAGTTATATAGCTCCTCCACCTCCAAAGCCCAAGGTTCCAGTTGAAACTAGTGGCAACGGGGCTGAAGATGGTGATAATGACGAGGACAATGATAATGAAGAGGATGAAGAAGACGAGGAAGAGGATAGTAGCAGCGATGAAGCTGAGGATGATGGAAGTCAGAGTGAAGAATTTAATGATGGTAAGTATATTTAA 1602 0.4057 MAEDTEGMKKGETIESQIEIAEEMKKGENIESQIETAMRSRVSYFKEQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLLKCLEGVVDDDAPRISEKAGENGASTQESEEPKKKSELKDEKDVCLEDEEKMEDSPVLGLLKEQKRAKLETKDDKGNGNKVVLSEALIMKAVRKRSSYIKANAESITMGGLRRQLEEDLKLDKFTLDPYKKFISQQLDEVLASSVVSEPAKNAKKIEKKKPDTKVTKKVSSEENSDSSDKETDEDGSQEDEVKPRKKVVPKGKVKTPVQSKKRKGEETDLSSKKRIKPAKAASEEISDAEDNGKNSEDDQSHSSSEKASKKKEVSAPVYGKRVEHLKSVIKACGMGVPPSIYKKIKQVPENKREEQLIKELEEILSREGLSSNPSEKDGRYCNFTQPQRRLGWSNLPCLLCHNEIKEVKRKKARAKELEGIDVSNIVSSSRRRSTSSYIAPPPPKPKVPVETSGNGAEDGDNDEDNDNEEDEEDEEEDSSSDEAEDDGSQSEEFNDGKYI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02165 533 PANTHER HIRA-INTERACTING PROTEIN 3 23 529 IPR037647 -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 490 523 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 292 352 - -
Vimu10g02165 533 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 165 225 IPR014876 -
Vimu10g02165 533 SMART CHZ_2 445 480 IPR019098 -
Vimu10g02165 533 Pfam Histone chaperone domain CHZ 447 478 IPR019098 -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 456 470 - -
Vimu10g02165 533 Coils Coil 312 332 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 110 133 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 226 352 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 234 259 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 444 533 - -
Vimu10g02165 533 MobiDBLite consensus disorder prediction 98 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02165 28 99 EF-hand Containing Proteins AT1G44780 41.667 6.19e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02165 - - gmx:100784437 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02165 10 31821952 31826396 Vimu10g02165 10 31821952 31826396 ECH